Publications by authors named "Douglas Yu"

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Real-time analysis and visualization of nanopore metagenomic samples with MARTi.
Ned Peel, Samuel Martin, Darren Heavens, Douglas W Yu, Matthew D Clark

Genome Res· November 2025

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Female fruit flies use social cues to make egg-clustering decisions.
Emily R Churchill, Emily K Fowler, Lucy A Friend, Marco Archetti, Douglas W Yu

BMC Biol· October 2025

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Female oviposition decisions are influenced by the microbial environment.
Emily K Fowler, Lucy A Friend, Emily R Churchill, Douglas W Yu, Marco Archetti

J Evol Biol· February 2025

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Airborne DNA reveals predictable spatial and seasonal dynamics of fungi.
Nerea Abrego, Brendan Furneaux, Bess Hardwick, Panu Somervuo, Isabella Palorinne, Yury A Rebriev, Yuri Rozhkov, Douglas W Yu

Nature· July 2024

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Combining environmental DNA and remote sensing for efficient, fine-scale mapping of arthropod biodiversity.
Yuanheng Li, Christian Devenish, Marie I Tosa, Mingjie Luo, David M Bell, Douglas W Yu

Philos Trans R Soc Lond B Biol Sci· June 2024

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Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA.
Otso Ovaskainen, Nerea Abrego, Brendan Furneaux, Bess Hardwick, Panu Somervuo, Yury A Rebriev, Yuri Rozhkov, Douglas W Yu

Sci Data· May 2024

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Novel community data in ecology-properties and prospects.
Florian Hartig, Nerea Abrego, Alex Bush, Jonathan M Chase, Gurutzeta Guillera-Arroita, Douglas W Yu

Trends Ecol Evol· March 2024

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Phylogenetic diversity only weakly mitigates climate-change-driven biodiversity loss in insect communities.
Zongxu Li, Benjamin Linard, Alfried P Vogler, Douglas W Yu, Zhengyang Wang

Mol Ecol· December 2023

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Extracting abundance information from DNA-based data.
Mingjie Luo, Yinqiu Ji, David Warton, Douglas W Yu

Mol Ecol Resour· January 2023

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Strategies for sample labelling and library preparation in DNA metabarcoding studies.
Kristine Bohmann, Vasco Elbrecht, Christian Carøe, Iliana Bista, Florian Leese, Douglas W Yu

Mol Ecol Resour· May 2022

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Measuring protected-area effectiveness using vertebrate distributions from leech iDNA.
Yinqiu Ji, Christopher C M Baker, Viorel D Popescu, Jiaxin Wang, Chunying Wu, Yuanheng Li, Douglas W Yu

Nat Commun· March 2022

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Climate-induced forest dieback drives compositional changes in insect communities that are more pronounced for rare species.
Lucas Sire, Paul Schmidt Yáñez, Cai Wang, Annie Bézier, Béatrice Courtial, Douglas W Yu

Commun Biol· January 2022

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Competition-based screening helps to secure the evolutionary stability of a defensive microbiome.
Sarah F Worsley, Tabitha M Innocent, Neil A Holmes, Mahmoud M Al-Bassam, Morten Schiøtt, Douglas W Yu

BMC Biol· September 2021

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Connecting high-throughput biodiversity inventories: Opportunities for a site-based genomic framework for global integration and synthesis.
Paula Arribas, Carmelo Andújar, Martin I Bidartondo, Kristine Bohmann, Éric Coissac, Douglas W Yu

Mol Ecol· March 2021

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Horizon Scan of the Belt and Road Initiative.
Alice C Hughes, Alex M Lechner, Alexander Chitov, Alexander Horstmann, Amy Hinsley, Douglas W Yu

Trends Ecol Evol· July 2020

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The life history of human foraging: Cross-cultural and individual variation.
Jeremy Koster, Richard McElreath, Kim Hill, Douglas Yu, Glenn Shepard

Sci Adv· June 2020

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Environmental DNA facilitates accurate, inexpensive, and multiyear population estimates of millions of anadromous fish.
Meredith Pochardt, Jennifer M Allen, Ted Hart, Sophie D L Miller, Douglas W Yu

Mol Ecol Resour· March 2020

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SPIKEPIPE: A metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change using DNA barcodes or mitogenomes.
Yinqiu Ji, Tea Huotari, Tomas Roslin, Niels Martin Schmidt, Jiaxin Wang, Douglas W Yu

Mol Ecol Resour· January 2020

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Environmental DNA for the enumeration and management of Pacific salmon.
Taal Levi, Jennifer M Allen, Donovan Bell, John Joyce, Joshua R Russell, Douglas W Yu

Mol Ecol Resour· May 2019

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Efficient assembly and long-term stability of defensive microbiomes via private resources and community bistability.
Gergely Boza, Sarah F Worsley, Douglas W Yu, István Scheuring

PLoS Comput Biol· May 2019

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An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies.
Jan Axtner, Alex Crampton-Platt, Lisa A Hörig, Azlan Mohamed, Charles C Y Xu, Douglas W Yu

Gigascience· April 2019

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Debugging diversity - a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool.
Ida Baerholm Schnell, Kristine Bohmann, Sebastian E Schultze, Stine R Richter, Dáithí C Murray, Douglas W Yu

Mol Ecol Resour· November 2018

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Why the COI barcode should be the community DNA metabarcode for the metazoa.
Carmelo Andújar, Paula Arribas, Douglas W Yu, Alfried P Vogler, Brent C Emerson

Mol Ecol· October 2018

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The genetic basis of a social polymorphism in halictid bees.
Sarah D Kocher, Ricardo Mallarino, Benjamin E R Rubin, Douglas W Yu, Hopi E Hoekstra

Nat Commun· October 2018

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Chemical warfare between leafcutter ant symbionts and a co-evolved pathogen.
Daniel Heine, Neil A Holmes, Sarah F Worsley, Ana Carolina A Santos, Tabitha M Innocent, Douglas W Yu

Nat Commun· June 2018

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