Publications by authors named "Heather Carleton"

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Genomic diversity and antimicrobial resistance of isolates from Africa: a PulseNet Africa initiative using nanopore sequencing to enhance genomic surveillance.
Ebenezer Foster-Nyarko, Shola Able-Thomas, Nana Eghele Adade, Rexford Adade, Jean Claude Blessa Anne, Heather Carleton

Microb Genom· December 2025

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Importance of Global Genomic Data Sharing to Prevent Illnesses Linked to Commercially Distributed Foods.
Matthew E Wise, Christine C Lee, Laura Gieraltowski, Thai-An Nguyen, Megin Nichols, Heather A Carleton

Food Saf (Tokyo)· September 2025

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Validation of Core and Whole-Genome Multi-Locus Sequence Typing Schemes for Shiga-Toxin-Producing (STEC) Outbreak Detection in a National Surveillance Network, PulseNet 2.0, USA.
Molly M Leeper, Morgan N Schroeder, Taylor Griswold, Mohit Thakur, Krittika Krishnan, Heather A Carleton

Microorganisms· June 2025

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Genomic Characterization of Escherichia coli O157:H7 Associated with Multiple Sources, United States.
Joseph S Wirth, Molly M Leeper, Peyton A Smith, Michael Vasser, Lee S Katz, Heather A Carleton

Emerg Infect Dis· May 2025

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Attribution of Salmonella enterica to Food Sources by Using Whole-Genome Sequencing Data.
Erica Billig Rose, Molly K Steele, Beth Tolar, James Pettengill, Michael Batz, Heather Carleton

Emerg Infect Dis· April 2025

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Kalamari: a representative set of genomes of public health concern.
Lee S Katz, Taylor Griswold, Rebecca L Lindsey, A C Lauer, Monica S Im, Heather A Carleton

Microbiol Resour Announc· February 2025

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Genetic Diversity in in Outbreaks of Foodborne and Zoonotic Origin in the USA in 2006-2017.
Eija Trees, Heather A Carleton, Jason P Folster, Laura Gieraltowski, Kelley Hise

Microorganisms· July 2024

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Antimicrobial resistance in multistate outbreaks of nontyphoidal infections linked to animal contact-United States, 2015-2018.
Erin Frey, G Sean Stapleton, Megin C Nichols, Lauren M Gollarza, Meseret Birhane, Heather A Carleton

J Clin Microbiol· January 2024

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Predicting Food Sources of Based on Genomic Profiling Using Random Forest Model.
Weidong Gu, Zhaohui Cui, Steven Stroika, Heather A Carleton, Amanda Conrad

Foodborne Pathog Dis· December 2023

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Rapid identification of enteric bacteria from whole genome sequences using average nucleotide identity metrics.
Rebecca L Lindsey, Lori M Gladney, Andrew D Huang, Taylor Griswold, Lee S Katz, Heather A Carleton

Front Microbiol· December 2023

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Reoccurring Escherichia coli O157:H7 Strain Linked to Leafy Greens-Associated Outbreaks, 2016-2019.
Jessica C Chen, Kane Patel, Peyton A Smith, Eshaw Vidyaprakash, Caroline Snyder, Heather A Carleton

Emerg Infect Dis· September 2023

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Evaluation of whole and core genome multilocus sequence typing allele schemes for outbreak detection in a national surveillance network, PulseNet USA.
Molly M Leeper, Beth M Tolar, Taylor Griswold, Eshaw Vidyaprakash, Kelley B Hise, Heather A Carleton

Front Microbiol· September 2023

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Evaluation of core genome and whole genome multilocus sequence typing schemes for and outbreak detection in the USA.
Lavin A Joseph, Taylor Griswold, Eshaw Vidyaprakash, Sung B Im, Grant M Williams, Heather A Carleton

Microb Genom· May 2023

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Cronobacter sakazakii Infections in Two Infants Linked to Powdered Infant Formula and Breast Pump Equipment - United States, 2021 and 2022.
Julia C Haston, Shanna Miko, Jennifer R Cope, Haley McKeel, Cynney Walters, Heather A Carleton

MMWR Morb Mortal Wkly Rep· March 2023

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Genome Sequences from a Reemergence of Vibrio cholerae in Haiti, 2022 Reveal Relatedness to Previously Circulating Strains.
Cynney Walters, Jessica Chen, Steven Stroika, Lee S Katz, Maryann Turnsek, Heather A Carleton

J Clin Microbiol· March 2023

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Increased Multidrug-Resistant Salmonella enterica I Serotype 4,[5],12:i:- Infections Associated with Pork, United States, 2009-2018.
Ian D Plumb, Allison C Brown, Erin K Stokes, Jessica C Chen, Heather Carleton

Emerg Infect Dis· February 2023

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Sequencing of Enteric Bacteria: Library Preparation Procedure Matters for Accurate Identification and Characterization.
Angela Poates, Jenny Truong, Rebecca Lindsey, Taylor Griswold, Amanda J Williams-Newkirk, Heather Carleton

Foodborne Pathog Dis· August 2022

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The power, potential, benefits, and challenges of implementing high-throughput sequencing in food safety systems.
Behzad Imanian, John Donaghy, Tim Jackson, Sanjay Gummalla, Balasubramanian Ganesan, Heather A Carleton

NPJ Sci Food· August 2022

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Molecular characterization of circulating Salmonella Typhi strains in an urban informal settlement in Kenya.
Caroline Ochieng, Jessica C Chen, Mike Powel Osita, Lee S Katz, Taylor Griswold, Heather A Carleton

PLoS Negl Trop Dis· August 2022

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Use of Whole Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States.
Eric L Stevens, Heather A Carleton, Jennifer Beal, Glenn E Tillman, Rebecca L Lindsey

J Food Prot· May 2022

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PulseNet International Survey on the Implementation of Whole Genome Sequencing in Low and Middle-Income Countries for Foodborne Disease Surveillance.
Taylor Davedow, Heather Carleton, Kristy Kubota, Daniel Palm, Morgan Schroeder

Foodborne Pathog Dis· May 2022

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Evaluating whole-genome sequencing quality metrics for enteric pathogen outbreaks.
Darlene D Wagner, Heather A Carleton, Eija Trees, Lee S Katz

PeerJ· November 2021

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Gen-FS coordinated proficiency test data for genomic foodborne pathogen surveillance, 2017 and 2018 exercises.
Ruth E Timme, Patricia C Lafon, Maria Balkey, Jennifer K Adams, Darlene Wagner, Heather Carleton

Sci Data· November 2020

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A multinational listeriosis outbreak and the importance of sharing genomic data.
James B Pettengill, Austin Markell, Amanda Conrad, Heather A Carleton, Jennifer Beal

Lancet Microbe· October 2020

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Comparison of Molecular Subtyping and Antimicrobial Resistance Detection Methods Used in a Large Multistate Outbreak of Extensively Drug-Resistant Campylobacter jejuni Infections Linked to Pet Store Puppies.
Lavin A Joseph, Louise K Francois Watkins, Jessica Chen, Kaitlin A Tagg, Christy Bennett, Heather A Carleton

J Clin Microbiol· September 2020

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