Publications by authors named "Jason Inman"

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MetScribeR: A Semiautomated Tool for Data Processing of In-House LC-MS Metabolite Reference Libraries.
Adam M Tisch, Jason M Inman, Ewy A Mathé, Djawed Bennouna

J Proteome Res· December 2025

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Modeling Friedreich's ataxia with Bergmann glia-enriched human cerebellar organoids.
Seungmi Ryu, Jason Inman, Hyenjong Hong, Vukasin M Jovanovic, Yeliz Gedik

bioRxiv· May 2025

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Scalable Hypothalamic Arcuate Neuron Differentiation from Human Pluripotent Stem Cells Suitable for Modeling Metabolic and Reproductive Disorders.
Vukasin M Jovanovic, Narisu Narisu, Lori L Bonnycastle, Ravi Tharakan, Kendall T Mesch, Jason Inman

bioRxiv· September 2024

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Stress-free cell aggregation by using the CEPT cocktail enhances embryoid body and organoid fitness.
Seungmi Ryu, Claire Weber, Pei-Hsuan Chu, Ben Ernest, Vukasin M Jovanovic, Jason Inman

Biofabrication· December 2023

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A defined roadmap of radial glia and astrocyte differentiation from human pluripotent stem cells.
Vukasin M Jovanovic, Claire Weber, Jaroslav Slamecka, Seungmi Ryu, Pei-Hsuan Chu, Jason Inman

Stem Cell Reports· August 2023

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Scalable generation of sensory neurons from human pluripotent stem cells.
Tao Deng, Vukasin M Jovanovic, Carlos A Tristan, Claire Weber, Pei-Hsuan Chu, Jason Inman

Stem Cell Reports· April 2023

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Large-scale comparative analysis of microbial pan-genomes using PanOCT.
Jason M Inman, Granger G Sutton, Erin Beck, Lauren M Brinkac, Thomas H Clarke

Bioinformatics· March 2019

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Supragingival Plaque Microbiome Ecology and Functional Potential in the Context of Health and Disease.
Josh L Espinoza, Derek M Harkins, Manolito Torralba, Andres Gomez, Sarah K Highlander, Jason M Inman

mBio· November 2018

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PanACEA: a bioinformatics tool for the exploration and visualization of bacterial pan-chromosomes.
Thomas H Clarke, Lauren M Brinkac, Jason M Inman, Granger Sutton, Derrick E Fouts

BMC Bioinformatics· June 2018

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Host Genetic Control of the Oral Microbiome in Health and Disease.
Andres Gomez, Josh L Espinoza, Derek M Harkins, Pamela Leong, Richard Saffery, Jason Inman

Cell Host Microbe· September 2017

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LOCUST: a custom sequence locus typer for classifying microbial isolates.
Lauren M Brinkac, Erin Beck, Jason Inman, Pratap Venepally, Derrick E Fouts

Bioinformatics· June 2017

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Individuals exhibit idiosyncratic eye-movement behavior profiles across tasks.
William Poynter, Megan Barber, Jason Inman, Coral Wiggins

Vision Res· August 2013

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PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species.
Derrick E Fouts, Lauren Brinkac, Erin Beck, Jason Inman, Granger Sutton

Nucleic Acids Res· December 2012

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Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvum strains.
Vanya Paralanov, Jin Lu, Lynn B Duffy, Donna M Crabb, Susmita Shrivastava, Jason Inman

BMC Microbiol· May 2012

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TheViral MetaGenome Annotation Pipeline(VMGAP):an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data.
Hernan A Lorenzi, Jeff Hoover, Jason Inman, Todd Safford, Sean Murphy

Stand Genomic Sci· July 2011

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Genetic and phenotypic diversity in Burkholderia: contributions by prophage and phage-like elements.
Catherine M Ronning, Liliana Losada, Lauren Brinkac, Jason Inman, Ricky L Ulrich

BMC Microbiol· July 2010

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Ergatis: a web interface and scalable software system for bioinformatics workflows.
Joshua Orvis, Jonathan Crabtree, Kevin Galens, Aaron Gussman, Jason M Inman

Bioinformatics· June 2010

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Pathema: a clade-specific bioinformatics resource center for pathogen research.
Lauren M Brinkac, Tanja Davidsen, Erin Beck, Anuradha Ganapathy, Elisabet Caler, Jason M Inman

Nucleic Acids Res· January 2010

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Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus.
Natalie D Fedorova, Nora Khaldi, Vinita S Joardar, Rama Maiti, Paolo Amedeo, Jason M Inman

PLoS Genet· April 2008

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A mammalian microRNA expression atlas based on small RNA library sequencing.
Pablo Landgraf, Mirabela Rusu, Robert Sheridan, Alain Sewer, Nicola Iovino, Jason Inman

Cell· June 2007

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Sensitive and specific method for detecting G protein-coupled receptor mRNAs.
Arne Hansen, Yidong Chen, Jason M Inman, Quang N Phan, Zhi-Qing Qi

Nat Methods· January 2007

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Evaluation of vector-primed cDNA library production from microgram quantities of total RNA.
Jonathan Kuo, Jason Inman, Michael Brownstein, Ted B Usdin

Nucleic Acids Res· December 2004

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A new strategy to amplify degraded RNA from small tissue samples for microarray studies.
Charlie C Xiang, Mei Chen, Li Ma, Quang N Phan, Jason M Inman

Nucleic Acids Res· May 2003

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Amine-modified random primers to label probes for DNA microarrays.
Charlie C Xiang, Olga A Kozhich, Mei Chen, Jason M Inman, Quang N Phan

Nat Biotechnol· July 2002

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