Publications by authors named "Jeffrey Grass"

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Systems Metabolic Engineering of Escherichia coli Improves Coconversion of Lignocellulose-Derived Sugars.
Joonhoon Kim, Mary Tremaine, Jeffrey A Grass, Hugh M Purdy, Robert Landick

Biotechnol J· September 2019

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Data exploration, quality control and statistical analysis of ChIP-exo/nexus experiments.
Rene Welch, Dongjun Chung, Jeffrey Grass, Robert Landick, Sündüz Keles

Nucleic Acids Res· September 2017

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Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification.
David H Keating, Yaoping Zhang, Irene M Ong, Sean McIlwain, Eduardo H Morales, Jeffrey A Grass

Front Microbiol· September 2014

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Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria.
Rembrandt J F Haft, David H Keating, Tyler Schwaegler, Michael S Schwalbach, Jeffrey Vinokur, Jeffrey A Grass

Proc Natl Acad Sci U S A· June 2014

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dPeak: high resolution identification of transcription factor binding sites from PET and SET ChIP-Seq data.
Dongjun Chung, Dan Park, Kevin Myers, Jeffrey Grass, Patricia Kiley

PLoS Comput Biol· May 2014

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DksA guards elongating RNA polymerase against ribosome-stalling-induced arrest.
Yan Zhang, Rachel A Mooney, Jeffrey A Grass, Priya Sivaramakrishnan, Christophe Herman

Mol Cell· March 2014

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Rho and NusG suppress pervasive antisense transcription in Escherichia coli.
Jason M Peters, Rachel A Mooney, Jeffrey A Grass, Erik D Jessen, Frances Tran

Genes Dev· December 2012

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Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen.
Michael S Schwalbach, David H Keating, Mary Tremaine, Wesley D Marner, Yaoping Zhang, Jeffrey A Grass

Appl Environ Microbiol· May 2012

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The RPB2 flap loop of human RNA polymerase II is dispensable for transcription initiation and elongation.
Murali Palangat, Jeffrey A Grass, Marie-France Langelier, Benoit Coulombe, Robert Landick

Mol Cell Biol· August 2011

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Context-dependent function of "GATA switch" sites in vivo.
Jonathan W Snow, Jennifer J Trowbridge, Kirby D Johnson, Tohru Fujiwara, Nikla E Emambokus, Jeffrey A Grass

Blood· May 2011

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A single cis element maintains repression of the key developmental regulator Gata2.
Jonathan W Snow, Jennifer J Trowbridge, Tohru Fujiwara, Nikla E Emambokus, Jeffrey A Grass

PLoS Genet· September 2010

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GATA transcription factors directly regulate the Parkinson's disease-linked gene alpha-synuclein.
Clemens R Scherzer, Jeffrey A Grass, Zhixiang Liao, Imelda Pepivani, Bin Zheng

Proc Natl Acad Sci U S A· August 2008

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Differential GATA factor stabilities: implications for chromatin occupancy by structurally similar transcription factors.
Louis J Lurie, Meghan E Boyer, Jeffrey A Grass, Emery H Bresnick

Biochemistry· January 2008

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Context-dependent GATA factor function: combinatorial requirements for transcriptional control in hematopoietic and endothelial cells.
Ryan J Wozniak, Meghan E Boyer, Jeffrey A Grass, Youngsook Lee, Emery H Bresnick

J Biol Chem· May 2007

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GATA-1-mediated transcriptional repression yields persistent transcription factor IIB-chromatin complexes.
Melissa L Martowicz, Jeffrey A Grass, Emery H Bresnick

J Biol Chem· December 2006

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Distinct functions of dispersed GATA factor complexes at an endogenous gene locus.
Jeffrey A Grass, Huie Jing, Shin-Il Kim, Melissa L Martowicz, Saumen Pal

Mol Cell Biol· October 2006

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Chromatin domain activation via GATA-1 utilization of a small subset of dispersed GATA motifs within a broad chromosomal region.
Hogune Im, Jeffrey A Grass, Kirby D Johnson, Shin-Il Kim, Meghan E Boyer

Proc Natl Acad Sci U S A· November 2005

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Patient-controlled analgesia.
Jeffrey A Grass

Anesth Analg· November 2005

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Molecular determinants of NOTCH4 transcription in vascular endothelium.
Jing Wu, Fumiko Iwata, Jeffrey A Grass, Cameron S Osborne, Laura Elnitski

Mol Cell Biol· February 2005

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Dynamic GATA factor interplay at a multicomponent regulatory region of the GATA-2 locus.
Melissa L Martowicz, Jeffrey A Grass, Meghan E Boyer, Hamza Guend, Emery H Bresnick

J Biol Chem· January 2005

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Measurement of protein-DNA interactions in vivo by chromatin immunoprecipitation.
Hogune Im, Jeffrey A Grass, Kirby D Johnson, Meghan E Boyer, Jing Wu

Methods Mol Biol· September 2004

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The safety and efficacy of a fentanyl patient-controlled transdermal system for acute postoperative analgesia: a multicenter, placebo-controlled trial.
Jacques E Chelly, Jeffrey Grass, Timothy W Houseman, Harold Minkowitz, Alex Pue

Anesth Analg· February 2004

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Highly restricted localization of RNA polymerase II within a locus control region of a tissue-specific chromatin domain.
Kirby D Johnson, Jeffrey A Grass, Changwon Park, Hogune Im, Kyunghee Choi

Mol Cell Biol· September 2003

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GATA-1-dependent transcriptional repression of GATA-2 via disruption of positive autoregulation and domain-wide chromatin remodeling.
Jeffrey A Grass, Meghan E Boyer, Saumen Pal, Jing Wu, Mitchell J Weiss

Proc Natl Acad Sci U S A· July 2003

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Comparison of ropivacaine-fentanyl patient-controlled epidural analgesia with morphine intravenous patient-controlled analgesia for perioperative analgesia and recovery after open colon surgery.
Robert B Steinberg, Spencer S Liu, Christopher L Wu, David C Mackey, Jeffrey A Grass

J Clin Anesth· December 2002

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