Publications by authors named "Jiujun Cheng"

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Comparative proteomics of biofilm development in discovers a distinct family of Ca-dependent adhesins.
Sura Ali, Alexander Stavropoulos, Benjamin Jenkins, Sadie Graves, Atiyeh Ahmadi, Jiujun Cheng

mBio· June 2025

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Rapid shift of gut microbiome and enrichment of beneficial microbes during arhatic yoga meditation retreat in a single-arm pilot study.
Sanjay Swarup, Abhishek Gupta, Marianne Chung, Vaishnavi Radhakrishnan, Valerie Davis, Jiujun Cheng

BMC Complement Med Ther· February 2025

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Research of wet string grid dust removal vehicle and creation of dust control area on tunnel working face.
Huan Deng, Shiqiang Chen, Junxin Huang, Zhirong Wu, Ying Rao, Jiujun Cheng

Sci Rep· April 2024

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A Novel Tiled Amplicon Sequencing Assay Targeting the Tomato Brown Rugose Fruit Virus (ToBRFV) Genome Reveals Widespread Distribution in Municipal Wastewater Treatment Systems in the Province of Ontario, Canada.
Delaney Nash, Isaac Ellmen, Jennifer J Knapp, Ria Menon, Alyssa K Overton, Jiujun Cheng

Viruses· March 2024

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Information-Theory-based Nondominated Sorting Ant Colony Optimization for Multiobjective Feature Selection in Classification.
Ziqian Wang, Shangce Gao, MengChu Zhou, Syuhei Sato, Jiujun Cheng

IEEE Trans Cybern· August 2023

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Pareto Dominance Archive and Coordinated Selection Strategy-Based Many-Objective Optimizer for Protein Structure Prediction.
Zhiming Zhang, Shangce Gao, Zhenyu Lei, Runqun Xiong, Jiujun Cheng

IEEE/ACM Trans Comput Biol Bioinform· June 2023

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Fully Complex-Valued Dendritic Neuron Model.
Shangce Gao, MengChu Zhou, Ziqian Wang, Daiki Sugiyama, Jiujun Cheng

IEEE Trans Neural Netw Learn Syst· April 2023

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Isolation of Genes Encoding Carbon Metabolism Pathways from Complex Microbial Communities.
Aranksha Thakor, Jiujun Cheng, Trevor C Charles

Methods Mol Biol· November 2022

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Slr4, a newly identified S-layer protein from marine Gammaproteobacteria, is a major biofilm matrix component.
Sura Ali, Benjamin Jenkins, Jiujun Cheng, Briallen Lobb, Xin Wei

Mol Microbiol· December 2020

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Dynamics of microbial populations and diversity in NAPL contaminated peat soil under varying water table conditions.
Pankaj Kumar Gupta, Behrad Gharedaghloo, Michael Lynch, Jiujun Cheng, Maria Strack

Environ Res· December 2020

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Time Series Resolution of the Fish Necrobiome Reveals a Decomposer Succession Involving Toxigenic Bacterial Pathogens.
Briallen Lobb, Rhiannon Hodgson, Michael D J Lynch, Michael J Mansfield, Jiujun Cheng

mSystems· April 2020

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Bi-objective Elite Differential Evolution Algorithm for Multivalued Logic Networks.
Jian Sun, Shangce Gao, Hongwei Dai, Jiujun Cheng, MengChu Zhou

IEEE Trans Cybern· January 2020

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Incorporation of Solvent Effect into Multi-Objective Evolutionary Algorithm for Improved Protein Structure Prediction.
Shangce Gao, Shuangbao Song, Jiujun Cheng, Yuki Todo, MengChu Zhou

IEEE/ACM Trans Comput Biol Bioinform· May 2019

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Dendritic Neuron Model With Effective Learning Algorithms for Classification, Approximation, and Prediction.
Shangce Gao, Mengchu Zhou, Yirui Wang, Jiujun Cheng, Hanaki Yachi

IEEE Trans Neural Netw Learn Syst· February 2019

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Methods for the Isolation of Genes Encoding Novel PHA Metabolism Enzymes from Complex Microbial Communities.
Jiujun Cheng, Ricardo Nordeste, Maria A Trainer, Trevor C Charles

Methods Mol Biol· February 2018

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The Completed PacBio Single-Molecule Real-Time Sequence of Strain OB3b Reveals the Presence of a Third Large Plasmid.
John R Heil, Michael D J Lynch, Jiujun Cheng, Ola Matysiakiewicz, Maya D'Alessio

Genome Announc· December 2017

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Functional metagenomics reveals novel β-galactosidases not predictable from gene sequences.
Jiujun Cheng, Tatyana Romantsov, Katja Engel, Andrew C Doxey, David R Rose

PLoS One· September 2017

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Discovery of a proteolytic flagellin family in diverse bacterial phyla that assembles enzymatically active flagella.
Ulrich Eckhard, Hina Bandukwala, Michael J Mansfield, Giada Marino, Jiujun Cheng

Nat Commun· September 2017

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Novel polyhydroxyalkanoate copolymers produced in Pseudomonas putida by metagenomic polyhydroxyalkanoate synthases.
Jiujun Cheng, Trevor C Charles

Appl Microbiol Biotechnol· September 2016

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Current and future resources for functional metagenomics.
Kathy N Lam, Jiujun Cheng, Katja Engel, Josh D Neufeld, Trevor C Charles

Front Microbiol· November 2015

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Evaluation of a pooled strategy for high-throughput sequencing of cosmid clones from metagenomic libraries.
Kathy N Lam, Michael W Hall, Katja Engel, Gregory Vey, Jiujun Cheng

PLoS One· June 2015

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Versatile broad-host-range cosmids for construction of high quality metagenomic libraries.
Jiujun Cheng, Lee Pinnell, Katja Engel, Josh D Neufeld, Trevor C Charles

J Microbiol Methods· April 2014

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The tRNAarg gene and engA are essential genes on the 1.7-Mb pSymB megaplasmid of Sinorhizobium meliloti and were translocated together from the chromosome in an ancestral strain.
George diCenzo, Branislava Milunovic, Jiujun Cheng, Turlough M Finan

J Bacteriol· January 2013

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Site-specific bacterial chromosome engineering: ΦC31 integrase mediated cassette exchange (IMCE).
John R Heil, Jiujun Cheng, Trevor C Charles

J Vis Exp· March 2012

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Nonlinear electrophoresis for purification of soil DNA for metagenomics.
Katja Engel, Lee Pinnell, Jiujun Cheng, Trevor C Charles, Josh D Neufeld

J Microbiol Methods· January 2012

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