Publications by authors named "John Shon"

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Effects of improved water, sanitation, handwashing and nutrition on early childhood IgG immune repertoire development against and enteroinvasive (EIEC).
Nikolina Walas, Everlyn Kamau, Minlu Zhang, Kathy Kamath, Jack Reifert, John Shon

medRxiv· November 2025

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Reconstructing pathogen-specific antibody binding epitopes and age-dependent immune signatures from proteomic-scale peptide libraries.
Everlyn Kamau, Nikolina Walas, Minlu Zhang, Kathy Kamath, Jack Reifert, John Shon

medRxiv· September 2025

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Cerebrospinal fluid immune phenotyping reveals distinct immunotypes of myalgic encephalomyelitis/chronic fatigue syndrome.
Victoria C Bastos, Kerrie A Greene, Alexandra Tabachnikova, Bornali Bhattacharjee, Per Sjögren, John Shon

J Immunol· July 2025

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Alzheimer's disease-associated CD83(+) microglia are linked with increased immunoglobulin G4 and human cytomegalovirus in the gut, vagal nerve, and brain.
Benjamin P Readhead, Diego F Mastroeni, Qi Wang, Maria A Sierra, Camila de Ávila, John Shon

Alzheimers Dement· January 2025

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Profiling antibody epitopes induced by mRNA-1273 vaccination and boosters.
Bethany Girard, Elisabeth Baum-Jones, Rebecca L Best, Thomas W Campbell, Jack Coupart, John Shon

Front Immunol· April 2024

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Distinguishing features of long COVID identified through immune profiling.
Jon Klein, Jamie Wood, Jillian R Jaycox, Rahul M Dhodapkar, Peiwen Lu, John Shon

Nature· November 2023

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Plasmodium infection is associated with cross-reactive antibodies to carbohydrate epitopes on the SARS-CoV-2 Spike protein.
Sarah Lapidus, Feimei Liu, Arnau Casanovas-Massana, Yile Dai, John D Huck, John Shon

Sci Rep· December 2022

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Distinguishing features of Long COVID identified through immune profiling.
Jon Klein, Jamie Wood, Jillian Jaycox, Peiwen Lu, Rahul M Dhodapkar, John Shon

medRxiv· August 2022

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Lack of association between pandemic chilblains and SARS-CoV-2 infection.
Jeff R Gehlhausen, Alicia J Little, Christine J Ko, Marc Emmenegger, Carolina Lucas, John Shon

Proc Natl Acad Sci U S A· March 2022

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Longitudinal Immune Profiling of a Severe Acute Respiratory Syndrome Coronavirus 2 Reinfection in a Solid Organ Transplant Recipient.
Jonathan Klein, Anderson F Brito, Paul Trubin, Peiwen Lu, Patrick Wong, John Shon

J Infect Dis· February 2022

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High-affinity, neutralizing antibodies to SARS-CoV-2 can be made without T follicular helper cells.
Jennifer S Chen, Ryan D Chow, Eric Song, Tianyang Mao, Benjamin Israelow, John C Shon

Sci Immunol· February 2022

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Serum and Cervicovaginal Fluid Antibody Profiling in Herpes Simplex Virus-Seronegative Recipients of the HSV529 Vaccine.
Kening Wang, Lesia Dropulic, Joel Bozekowski, Harlan L Pietz, Sinthujan Jegaskanda, John C Shon

J Infect Dis· November 2021

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High-resolution epitope mapping and characterization of SARS-CoV-2 antibodies in large cohorts of subjects with COVID-19.
Winston A Haynes, Kathy Kamath, Joel Bozekowski, Elisabeth Baum-Jones, Melissa Campbell, John C Shon

Commun Biol· November 2021

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Protein-Based Immunome Wide Association Studies (PIWAS) for the Discovery of Significant Disease-Associated Antigens.
Winston A Haynes, Kathy Kamath, Rebecca Waitz, Patrick S Daugherty, John C Shon

Front Immunol· September 2021

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Immunogenic amino acid motifs and linear epitopes of COVID-19 mRNA vaccines.
Adam V Wisnewski, Carrie A Redlich, Jian Liu, Kathy Kamath, Queenie-Ann Abad, John C Shon

PLoS One· September 2021

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Cytokine release syndrome in a patient with colorectal cancer after vaccination with BNT162b2.
Lewis Au, Annika Fendler, Scott T C Shepherd, Karolina Rzeniewicz, Maddalena Cerrone, John Shon

Nat Med· August 2021

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Phase Ib study of patients with metastatic castrate-resistant prostate cancer treated with different sequencing regimens of atezolizumab and sipuleucel-T.
Tanya Dorff, Yosuke Hirasawa, Jared Acoba, Ian Pagano, David Tamura, John Shon

J Immunother Cancer· August 2021

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Longitudinal immune profiling of a SARS-CoV-2 reinfection in a solid organ transplant recipient.
Jon Klein, Anderson Brito, Paul Trubin, Peiwen Lu, Patrick Wong, John Shon

Res Sq· May 2021

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infection induces cross-reactive antibodies to carbohydrate epitopes on the SARS-CoV-2 Spike protein.
Sarah Lapidus, Feimei Liu, Arnau Casanovas-Massana, Yile Dai, John D Huck, John Shon

medRxiv· May 2021

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Case Study: Longitudinal immune profiling of a SARS-CoV-2 reinfection in a solid organ transplant recipient.
Jonathan Klein, Anderson F Brito, Paul Trubin, Peiwen Lu, Patrick Wong, John Shon

medRxiv· March 2021

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Serum Epitope Repertoire Analysis Enables Early Detection of Lyme Disease with Improved Sensitivity in an Expandable Multiplex Format.
Jack Reifert, Kathy Kamath, Joel Bozekowski, Ewa Lis, Elizabeth J Horn, John Shon

J Clin Microbiol· January 2021

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Autoantibody Landscape in Patients with Advanced Prostate Cancer.
William S Chen, Winston A Haynes, Rebecca Waitz, Kathy Kamath, Agustin Vega-Crespo, John C Shon

Clin Cancer Res· December 2020

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Author Correction: Predicting the clinical impact of human mutation with deep neural networks.
Laksshman Sundaram, Hong Gao, Samskruthi Reddy Padigepati, Jeremy F McRae, Yanjun Li, John Shon

Nat Genet· February 2019

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Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer.
David A Quigley, Ha X Dang, Shuang G Zhao, Paul Lloyd, Rahul Aggarwal, John Shon

Cell· October 2018

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Predicting the clinical impact of human mutation with deep neural networks.
Laksshman Sundaram, Hong Gao, Samskruthi Reddy Padigepati, Jeremy F McRae, Yanjun Li, John Shon

Nat Genet· August 2018

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