Publications by authors named "Jonathan D Cook"

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Results of TOR001: An open-label single patient study using targeted bacteriophage therapy for the treatment of chronic urinary tract infection.
Jonathan D Cook, Payton B Hooey, Keiko C Salazar, Justin R Clark, Umesh Jain

Int J Antimicrob Agents· December 2025

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Fomites Could Determine Severity of SARS-CoV-2 Outbreaks in Low-Density White-Tailed Deer () Populations.
Elias G Rosenblatt, Jonathan D Cook, Graziella V DiRenzo, Evan H Campbell Grant, Michael C Runge

Transbound Emerg Dis· June 2025

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One Health collaboration is more effective than single-sector actions at mitigating SARS-CoV-2 in deer.
Jonathan D Cook, Elias Rosenblatt, Graziella V Direnzo, Evan H Campbell Grant, Brittany A Mosher

Nat Commun· October 2024

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Reframing wildlife disease management problems with decision analysis.
Margaret C McEachran, Johanna A Harvey, Riley O Mummah, Molly C Bletz, Claire S Teitelbaum, Jonathan D Cook

Conserv Biol· August 2024

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Epidemiological modeling of SARS-CoV-2 in white-tailed deer (Odocoileus virginianus) reveals conditions for introduction and widespread transmission.
Elias Rosenblatt, Jonathan D Cook, Graziella V DiRenzo, Evan H Campbell Grant, Fernando Arce

PLoS Comput Biol· July 2024

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Phage Therapy in the Management of Urinary Tract Infections: A Comprehensive Systematic Review.
Amany M Al-Anany, Payton B Hooey, Jonathan D Cook, Lori L Burrows, Julia Martyniuk

Phage (New Rochelle)· September 2023

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Bayesian forecasting of disease spread with little or no local data.
Jonathan D Cook, David M Williams, Daniel P Walsh, Trevor J Hefley

Sci Rep· May 2023

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Conformational plasticity of the HIV-1 gp41 immunodominant region is recognized by multiple non-neutralizing antibodies.
Jonathan D Cook, Adree Khondker, Jeffrey E Lee

Commun Biol· March 2022

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Risks posed by SARS-CoV-2 to North American bats during winter fieldwork.
Jonathan D Cook, Evan H C Grant, Jeremy T H Coleman, Jonathan M Sleeman, Michael C Runge

Conserv Sci Pract· June 2021

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Snapshot of an influenza virus glycoprotein fusion intermediate.
Vitor Hugo B Serrão, Jonathan D Cook, Jeffrey E Lee

Cell Rep· May 2021

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Optimization of peptidic HIV-1 fusion inhibitor T20 by phage display.
Gang Chen, Jonathan D Cook, Wei Ye, Jeffrey E Lee, Sachdev S Sidhu

Protein Sci· August 2019

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Tyrosyl phosphorylation of KRAS stalls GTPase cycle via alteration of switch I and II conformation.
Yoshihito Kano, Teklab Gebregiworgis, Christopher B Marshall, Nikolina Radulovich, Betty P K Poon, Jonathan D Cook

Nat Commun· January 2019

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Structure of the infectious salmon anemia virus receptor complex illustrates a unique binding strategy for attachment.
Jonathan D Cook, Azmiri Sultana, Jeffrey E Lee

Proc Natl Acad Sci U S A· April 2017

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New structural and functional insight into the regulation of Ras.
Yoshihito Kano, Jonathan D Cook, Jeffrey E Lee, Michael Ohh

Semin Cell Dev Biol· October 2016

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Electrostatic Architecture of the Infectious Salmon Anemia Virus (ISAV) Core Fusion Protein Illustrates a Carboxyl-Carboxylate pH Sensor.
Jonathan D Cook, Hazel Soto-Montoya, Markus K Korpela, Jeffrey E Lee

J Biol Chem· July 2015

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Src promotes GTPase activity of Ras via tyrosine 32 phosphorylation.
Severa Bunda, Pardeep Heir, Tharan Srikumar, Jonathan D Cook, Kelly Burrell

Proc Natl Acad Sci U S A· September 2014

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Crystal structures of beta- and gammaretrovirus fusion proteins reveal a role for electrostatic stapling in viral entry.
Halil Aydin, Jonathan D Cook, Jeffrey E Lee

J Virol· January 2014

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The secret life of viral entry glycoproteins: moonlighting in immune evasion.
Jonathan D Cook, Jeffrey E Lee

PLoS Pathog· December 2013

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A convenient and general expression platform for the production of secreted proteins from human cells.
Halil Aydin, Farshad C Azimi, Jonathan D Cook, Jeffrey E Lee

J Vis Exp· July 2012

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