Publications by authors named "Joseph D Bauman"

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Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
Ashima Chopra, Joseph D Bauman, Francesc X Ruiz, Eddy Arnold

J Med Chem· May 2023

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Targeting HIV-1 Reverse Transcriptase Using a Fragment-Based Approach.
Mahta Mansouri, Shawn Rumrill, Shane Dawson, Adam Johnson, Jo-Anne Pinson, Joseph D Bauman

Molecules· March 2023

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Cryo-EM structure of the HIV-1 Pol polyprotein provides insights into virion maturation.
Jerry Joe E K Harrison, Dario Oliveira Passos, Jessica F Bruhn, Joseph D Bauman, Lynda Tuberty

Sci Adv· July 2022

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Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT).
Jerry Joe E K Harrison, Steve Tuske, Kalyan Das, Francesc X Ruiz, Joseph D Bauman

Viruses· July 2021

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Integrative structural biology studies of HIV-1 reverse transcriptase binding to a high-affinity DNA aptamer.
Steve Tuske, Jie Zheng, Erik D Olson, Francesc X Ruiz, Bruce D Pascal, Joseph D Bauman

Curr Res Struct Biol· June 2020

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Aryl and Arylalkyl Substituted 3-Hydroxypyridin-2(1H)-ones: Synthesis and Evaluation as Inhibitors of Influenza A Endonuclease.
Hye Yeon Sagong, Joseph D Bauman, Aitor Nogales, Luis Martínez-Sobrido, Eddy Arnold

ChemMedChem· June 2019

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Structure of HIV-1 reverse transcriptase/d4TTP complex: Novel DNA cross-linking site and pH-dependent conformational changes.
Sergio E Martinez, Joseph D Bauman, Kalyan Das, Eddy Arnold

Protein Sci· March 2019

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A New Class of Allosteric HIV-1 Integrase Inhibitors Identified by Crystallographic Fragment Screening of the Catalytic Core Domain.
Disha Patel, Janet Antwi, Pratibha C Koneru, Erik Serrao, Stefano Forli, Joseph D Bauman

J Biol Chem· November 2016

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Rapid experimental SAD phasing and hot-spot identification with halogenated fragments.
Joseph D Bauman, Jerry Joe E K Harrison, Eddy Arnold

IUCrJ· January 2016

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Advantages of crystallographic fragment screening: functional and mechanistic insights from a powerful platform for efficient drug discovery.
Disha Patel, Joseph D Bauman, Eddy Arnold

Prog Biophys Mol Biol· September 2015

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Differential isotopic enrichment to facilitate characterization of asymmetric multimeric proteins using hydrogen/deuterium exchange mass spectrometry.
Devrishi Goswami, Steve Tuske, Bruce D Pascal, Joseph D Bauman, Disha Patel

Anal Chem· April 2015

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Phenyl substituted 4-hydroxypyridazin-3(2H)-ones and 5-hydroxypyrimidin-4(3H)-ones: inhibitors of influenza A endonuclease.
Hye Yeon Sagong, Joseph D Bauman, Disha Patel, Kalyan Das, Eddy Arnold

J Med Chem· October 2014

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Crystallographic fragment screening and structure-based optimization yields a new class of influenza endonuclease inhibitors.
Joseph D Bauman, Disha Patel, Steven F Baker, R S K Vijayan, Amy Xiang

ACS Chem Biol· November 2013

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Phenyl substituted 3-hydroxypyridin-2(1H)-ones: inhibitors of influenza A endonuclease.
Ajit K Parhi, Amy Xiang, Joseph D Bauman, Disha Patel, R S K Vijayan

Bioorg Med Chem· November 2013

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Extension into the entrance channel of HIV-1 reverse transcriptase--crystallography and enhanced solubility.
Mariela Bollini, Kathleen M Frey, José A Cisneros, Krasimir A Spasov, Kalyan Das, Joseph D Bauman

Bioorg Med Chem Lett· September 2013

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3-Hydroxyquinolin-2(1H)-ones As Inhibitors of Influenza A Endonuclease.
Hye Yeon Sagong, Ajit Parhi, Joseph D Bauman, Disha Patel, R S K Vijayan

ACS Med Chem Lett· June 2013

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Detecting allosteric sites of HIV-1 reverse transcriptase by X-ray crystallographic fragment screening.
Joseph D Bauman, Disha Patel, Chhaya Dharia, Marc W Fromer, Sameer Ahmed

J Med Chem· April 2013

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Snapshot of the equilibrium dynamics of a drug bound to HIV-1 reverse transcriptase.
Daniel G Kuroda, Joseph D Bauman, J Reddy Challa, Disha Patel, Thomas Troxler

Nat Chem· March 2013

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A comparison of the ability of rilpivirine (TMC278) and selected analogues to inhibit clinically relevant HIV-1 reverse transcriptase mutants.
Barry C Johnson, Gary T Pauly, Ganesha Rai, Disha Patel, Joseph D Bauman

Retrovirology· December 2012

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Fragment screening and HIV therapeutics.
Joseph D Bauman, Disha Patel, Eddy Arnold

Top Curr Chem· August 2012

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HIV-1 reverse transcriptase complex with DNA and nevirapine reveals non-nucleoside inhibition mechanism.
Kalyan Das, Sergio E Martinez, Joseph D Bauman, Eddy Arnold

Nat Struct Mol Biol· January 2012

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Identification of alternative binding sites for inhibitors of HIV-1 ribonuclease H through comparative analysis of virtual enrichment studies.
Anthony K Felts, Krystal Labarge, Joseph D Bauman, Dishaben V Patel, Daniel M Himmel

J Chem Inf Model· August 2011

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Synthesis, activity, and structural analysis of novel α-hydroxytropolone inhibitors of human immunodeficiency virus reverse transcriptase-associated ribonuclease H.
Suhman Chung, Daniel M Himmel, Jian-Kang Jiang, Krzysztof Wojtak, Joseph D Bauman

J Med Chem· July 2011

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Structure of the guanylyltransferase domain of human mRNA capping enzyme.
Chun Chu, Kalyan Das, James R Tyminski, Joseph D Bauman, Rongjin Guan

Proc Natl Acad Sci U S A· June 2011

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Crystal structure of tert-butyldimethylsilyl-spiroaminooxathioledioxide-thymine (TSAO-T) in complex with HIV-1 reverse transcriptase (RT) redefines the elastic limits of the non-nucleoside inhibitor-binding pocket.
Kalyan Das, Joseph D Bauman, Angela S Rim, Chhaya Dharia, Arthur D Clark

J Med Chem· April 2011

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