Publications by authors named "Joseph Romano"

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CASTER-DTA: Equivariant Graph Neural Networks for Predicting Drug-Target Affinity.
Rachit Kumar, Joseph D Romano, Marylyn D Ritchie

bioRxiv· September 2025

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DRIVE-KG: Enhancing variant-phenotype association discovery in understudied complex diseases using heterogeneous knowledge graphs.
Ananya Rajagopalan, Tram Anh Nguyen, Lindsay A Guare, Andre Luis Garao Rico, Rasika Venkatesh, Joseph D Romano

medRxiv· August 2025

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CASTER-DTA: equivariant graph neural networks for predicting drug-target affinity.
Rachit Kumar, Joseph D Romano, Marylyn D Ritchie

Brief Bioinform· August 2025

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Network-based analyses of multiomics data in biomedicine.
Rachit Kumar, Joseph D Romano, Marylyn D Ritchie

BioData Min· May 2025

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Optimal Reconstruction of the Hellings and Downs Correlation.
Bruce Allen, Joseph D Romano

Phys Rev Lett· January 2025

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Session Introduction: AI and Machine Learning in Clinical Medicine: Generative and Interactive Systems at the Human-Machine Interface.
Fateme Nateghi Haredasht, Dokyoon Kim, Joseph D Romano, Geoff Tison, Roxana Daneshjou

Pac Symp Biocomput· December 2024

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Centralized and Federated Models for the Analysis of Clinical Data.
Ruowang Li, Joseph D Romano, Yong Chen, Jason H Moore

Annu Rev Biomed Data Sci· August 2024

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The choice-wide behavioral association study: data-driven identification of interpretable behavioral components.
David B Kastner, Greer Williams, Cristofer Holobetz, Joseph P Romano, Peter Dayan

bioRxiv· April 2024

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The Alzheimer's Knowledge Base: A Knowledge Graph for Alzheimer Disease Research.
Joseph D Romano, Van Truong, Rachit Kumar, Mythreye Venkatesan, Britney E Graham

J Med Internet Res· April 2024

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Knowledge graph aids comprehensive explanation of drug and chemical toxicity.
Yun Hao, Joseph D Romano, Jason H Moore

CPT Pharmacometrics Syst Pharmacol· August 2023

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Strategic actions to advance multipurpose prevention technologies in low- and middle-income countries.
Bethany Young Holt, Ariane van der Straten, Taryn Barker, Z Mike Chirenje, Anne-Isabelle Cameron, Joseph Romano

Front Reprod Health· July 2023

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Discovering Venom-Derived Drug Candidates Using Differential Gene Expression.
Joseph D Romano, Hai Li, Tanya Napolitano, Ronald Realubit, Charles Karan

Toxins (Basel)· July 2023

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A clinical model to predict postoperative improvement in sub-domains of the modified Japanese Orthopedic Association score for degenerative cervical myelopathy.
Byron F Stephens, Lydia J McKeithan, W Hunter Waddell, Joseph Romano, Anthony M Steinle

Eur Spine J· April 2023

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Exploring genetic influences on adverse outcome pathways using heuristic simulation and graph data science.
Joseph D Romano, Liang Mei, Jonathan Senn, Jason H Moore, Holly M Mortensen

Comput Toxicol· February 2023

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Omics Methods in Toxins Research-A Toolkit to Drive the Future of Scientific Inquiry.
Joseph D Romano

Toxins (Basel)· November 2022

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Outcomes Following Direct Versus Indirect Decompression Techniques for Lumbar Spondylolisthesis: A Propensity-Matched Analysis.
Lydia J McKeithan, Joseph W Romano, William H Waddell, Anthony M Steinle, Jacquelyn S Pennings

Spine (Phila Pa 1976)· October 2022

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The promise of automated machine learning for the genetic analysis of complex traits.
Elisabetta Manduchi, Joseph D Romano, Jason H Moore

Hum Genet· September 2022

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Knowledge-guided deep learning models of drug toxicity improve interpretation.
Yun Hao, Joseph D Romano, Jason H Moore

Patterns (N Y)· September 2022

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Automating Predictive Toxicology Using ComptoxAI.
Joseph D Romano, Yun Hao, Jason H Moore, Trevor M Penning

Chem Res Toxicol· August 2022

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PMLB v1.0: an open-source dataset collection for benchmarking machine learning methods.
Joseph D Romano, Trang T Le, William La Cava, John T Gregg, Daniel J Goldberg

Bioinformatics· January 2022

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Improving QSAR Modeling for Predictive Toxicology using Publicly Aggregated Semantic Graph Data and Graph Neural Networks.
Joseph D Romano, Yun Hao, Jason H Moore

Pac Symp Biocomput· January 2022

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Drug-releasing vaginal rings for HIV/STI and pregnancy prevention: a review of recent advances and clinical applications.
Thesla Palanee-Phillips, Marc M Baum, John A Moss, Meredith R Clark, Jeremy Nuttall, Joseph W Romano

Expert Opin Drug Deliv· January 2022

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Multipurpose Prevention Technologies: Opportunities and Challenges to Ensure Advancement of the Most Promising MPTs.
Bethany Young Holt, Jim A Turpin, Joseph Romano

Front Reprod Health· September 2021

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TPOT-NN: augmenting tree-based automated machine learning with neural network estimators.
Joseph D Romano, Trang T Le, Weixuan Fu, Jason H Moore

Genet Program Evolvable Mach· June 2021

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An unusual pelvic foreign body.
James Humble, Joseph D Romano, Gregory Johnston

J Am Coll Emerg Physicians Open· June 2021

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