Publications by authors named "Marcus Brubaker"

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Efficient high-resolution refinement in cryo-EM with stochastic gradient descent.
Bogdan Toader, Marcus A Brubaker, Roy R Lederman

Acta Crystallogr D Struct Biol· July 2025

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Efficient high-resolution refinement in cryo-EM with stochastic gradient descent.
Bogdan Toader, Marcus A Brubaker, Roy R Lederman

ArXiv· June 2025

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Adaptation of the Independent Metropolis-Hastings Sampler with Normalizing Flow Proposals.
James A Brofos, Marylou Gabrié, Marcus A Brubaker, Roy R Lederman

Proc Mach Learn Res· March 2022

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Normalizing Flows: An Introduction and Review of Current Methods.
Ivan Kobyzev, Simon J D Prince, Marcus A Brubaker

IEEE Trans Pattern Anal Mach Intell· November 2021

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Development and Validation of a Virtual Examination Tool for Firearm Forensics,
Pierre Duez, Todd Weller, Marcus Brubaker, Richard E Hockensmith, Ryan Lilien

J Forensic Sci· July 2018

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Building Proteins in a Day: Efficient 3D Molecular Structure Estimation with Electron Cryomicroscopy.
Ali Punjani, Marcus A Brubaker, David J Fleet

IEEE Trans Pattern Anal Mach Intell· April 2017

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cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination.
Ali Punjani, John L Rubinstein, David J Fleet, Marcus A Brubaker

Nat Methods· March 2017

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Stan: A Probabilistic Programming Language.
Bob Carpenter, Andrew Gelman, Matthew D Hoffman, Daniel Lee, Ben Goodrich, Marcus A Brubaker

J Stat Softw· January 2017

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Map-Based Probabilistic Visual Self-Localization.
Marcus A Brubaker, Andreas Geiger, Raquel Urtasun

IEEE Trans Pattern Anal Mach Intell· April 2016

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Description and comparison of algorithms for correcting anisotropic magnification in cryo-EM images.
Jianhua Zhao, Marcus A Brubaker, Samir Benlekbir, John L Rubinstein

J Struct Biol· November 2015

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Alignment of cryo-EM movies of individual particles by optimization of image translations.
John L Rubinstein, Marcus A Brubaker

J Struct Biol· November 2015

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TMaCS: a hybrid template matching and classification system for partially-automated particle selection.
Jianhua Zhao, Marcus A Brubaker, John L Rubinstein

J Struct Biol· March 2013

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A Bayesian method for 3D macromolecular structure inference using class average images from single particle electron microscopy.
Navdeep Jaitly, Marcus A Brubaker, John L Rubinstein, Ryan H Lilien

Bioinformatics· October 2010

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