Publications by authors named "Maria Jesus Martin"

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The functional landscape of the human ubiquitinome.
Julian van Gerwen, Maximilian Fottner, Shengbo Wang, Bede Busby, Ellen Boswell, Maria-Jesus Martin

bioRxiv· October 2025

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High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.
Eric W Deutsch, Leron W Kok, Jonathan M Mudge, Jorge Ruiz-Orera, Ivo Fierro-Monti, Maria Jesus Martin, Thomas F Martinez

bioRxiv· July 2025

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REDIportal: toward an integrated view of the A-to-I editing.
Pietro D'Addabbo, Roni Cohen-Fultheim, Itamar Twersky, Adriano Fonzino, Domenico Alessandro Silvestris, Maria-Jesus Martin

Nucleic Acids Res· January 2025

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Isolation and Total Synthesis of PM170453, a New Cyclic Depsipeptide Isolated from sp.
Rogelio Fernández, Marta Pérez, Alejandro Losada, Silvia Reboredo, Asier Gómez-San Juan

Mar Drugs· June 2024

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SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins.
Gökhan Özsarı, Ahmet Sureyya Rifaioglu, Ahmet Atakan, Tunca Doğan, Maria Jesus Martin

Bioinformatics· September 2022

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A roadmap for the functional annotation of protein families: a community perspective.
Valérie de Crécy-Lagard, Rocio Amorin de Hegedus, Cecilia Arighi, Jill Babor, Alex Bateman, Maria-Jesus Martin

Database (Oxford)· August 2022

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Method for Independent Estimation of the False Localization Rate for Phosphoproteomics.
Kerry A Ramsbottom, Ananth Prakash, Yasset Perez Riverol, Oscar Martin Camacho, Maria-Jesus Martin

J Proteome Res· July 2022

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Standardized annotation of translated open reading frames.
Jonathan M Mudge, Jorge Ruiz-Orera, John R Prensner, Marie A Brunet, Ferriol Calvet, Thomas F Martinez, Maria Jesus Martin

Nat Biotechnol· July 2022

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The IntAct database: efficient access to fine-grained molecular interaction data.
Noemi Del Toro, Anjali Shrivastava, Eliot Ragueneau, Birgit Meldal, Colin Combe, Maria Jesus Martin

Nucleic Acids Res· January 2022

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Baseline haemoglobin and thromboelastometry are predictive of red blood cell requirements and one-year mortality in liver transplantation.
Laura Viguera, Annabel Blasi, Enric Reverter, Begoña Arjona, Marta Caballero, Maria Jesús Martin

Transfus Apher Sci· December 2021

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Liver transplant with controlled donors after circulatory death with normothermic regional perfusion and brain dead donors: A multicenter cohort study of transfusion, one-year graft survival and mortality.
Laura Viguera, Annabel Blasi, Enric Reverter, Begoña Arjona, Marta Caballero, Maria Jesús Martin

Int J Surg· December 2021

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Influence of Infill Pattern on Mechanical Behavior of Polymeric and Composites Specimens Manufactured Using Fused Filament Fabrication Technology.
María Jesús Martín, Juan Antonio Auñón, Francisco Martín

Polymers (Basel)· August 2021

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Gene Ontology Curation of Neuroinflammation Biology Improves the Interpretation of Alzheimer's Disease Gene Expression Data.
Barbara Kramarz, Rachael P Huntley, Milagros Rodríguez-López, Paola Roncaglia, Shirin C C Saverimuttu, Maria-Jesus Martin

J Alzheimers Dis· May 2021

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UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.
Alistair MacDougall, Vladimir Volynkin, Rabie Saidi, Diego Poggioli, Hermann Zellner, Maria-Jesus Martin

Bioinformatics· April 2021

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UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.
Alistair MacDougall, Vladimir Volynkin, Rabie Saidi, Diego Poggioli, Hermann Zellner, Maria-Jesus Martin

Bioinformatics· November 2020

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DEEPScreen: high performance drug-target interaction prediction with convolutional neural networks using 2-D structural compound representations.
Ahmet Sureyya Rifaioglu, Esra Nalbat, Volkan Atalay, Maria Jesus Martin, Rengul Cetin-Atalay

Chem Sci· March 2020

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Advances and Applications in the Quest for Orthologs.
Natasha Glover, Christophe Dessimoz, Ingo Ebersberger, Sofia K Forslund, Toni Gabaldón, Maria-Jesus Martin

Mol Biol Evol· October 2019

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Are Sexist Attitudes and Gender Stereotypes Linked? A Critical Feminist Approach With a Spanish Sample.
Rubén García-Sánchez, Carmen Almendros, Begoña Aramayona, María Jesús Martín, María Soria-Oliver

Front Psychol· October 2019

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Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases.
Ahmet Sureyya Rifaioglu, Heval Atas, Maria Jesus Martin, Rengul Cetin-Atalay, Volkan Atalay

Brief Bioinform· September 2019

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DEEPred: Automated Protein Function Prediction with Multi-task Feed-forward Deep Neural Networks.
Ahmet Sureyya Rifaioglu, Tunca Doğan, Maria Jesus Martin, Rengul Cetin-Atalay, Volkan Atalay

Sci Rep· May 2019

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Influence of Milling Parameters on Mechanical Properties of AA7075 Aluminum under Corrosion Conditions.
María Jesús Martín, María José Cano, Germán Castillo, Manuel José Herrera, Francisco Martín

Materials (Basel)· September 2018

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ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature.
Alperen Dalkiran, Ahmet Sureyya Rifaioglu, Maria Jesus Martin, Rengul Cetin-Atalay, Volkan Atalay

BMC Bioinformatics· September 2018

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Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants.
Ahmet Sureyya Rifaioglu, Tunca Doğan, Ömer Sinan Saraç, Tulin Ersahin, Rabie Saidi, Maria Jesus Martin

Proteins· February 2018

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Minimizing proteome redundancy in the UniProt Knowledgebase.
Borisas Bursteinas, Ramona Britto, Benoit Bely, Andrea Auchincloss, Catherine Rivoire, Maria Jesus Martin

Database (Oxford)· November 2017

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Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.
Julie A McMurry, Nick Juty, Niklas Blomberg, Tony Burdett, Tom Conlin, Maria Jesus Martin

PLoS Biol· June 2017

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