Publications by authors named "Mark Andrake"

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PALB2 and 53BP1 govern post-resection homologous recombination DNA repair.
Yifan Wang, Yan Coulombe, Wei-Ting Yueh, Gregory D Conway, Larissa Milano, Mark Andrake

Mol Cell· November 2025

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PALB2 and 53BP1 govern post-resection homologous recombination DNA repair.
Yifan Wang, Yan Coulombe, Wei-Ting Yueh, Gregory D Conway, Larissa Milano, Mark Andrake

Mol Cell· August 2025

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YAP1 and QSER1 are Key Modulators of Embryonic Signaling Pathways in the Mammalian Epiblast.
Elizabeth Abraham, Thomas Roule, Aidan Douglas, Emily Megill, Olivia M Pericak, Mark D Andrake

bioRxiv· June 2025

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A retinoic acid:YAP1 signaling axis controls atrial lineage commitment.
Elizabeth Abraham, Aleksandra Kostina, Brett Volmert, Thomas Roule, Ling Huang, Mark D Andrake

Cell Rep· May 2025

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Exploring the potential role of palladin in modulating human CAF/ECM functional units.
Aleksandr Dolskii, Sérgio A Alcantara Dos Santos, Mark Andrake, Janusz Franco-Barraza, Roland L Dunbrack

Cytoskeleton (Hoboken)· March 2025

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Netrin G1 Ligand is a new stromal immunomodulator that promotes pancreatic cancer.
Débora B Vendramini-Costa, Ralph Francescone, Janusz Franco-Barraza, Tiffany Luong, Myree Graves, Mark Andrake

bioRxiv· May 2024

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Correction: Exploring Co-occurring POLE Exonuclease and Non-exonuclease Domain Mutations and Their Impact on Tumor Mutagenicity.
Shreya M Shah, Elena V Demidova, Salena Ringenbach, Bulat Faezov, Mark Andrake

Cancer Res Commun· May 2024

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Necroptosis blockade prevents lung injury in severe influenza.
Avishekh Gautam, David F Boyd, Sameer Nikhar, Ting Zhang, Ioannis Siokas, Mark D Andrake

Nature· April 2024

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Exploring Co-occurring POLE Exonuclease and Non-exonuclease Domain Mutations and Their Impact on Tumor Mutagenicity.
Shreya M Shah, Elena V Demidova, Salena Ringenbach, Bulat Faezov, Mark Andrake

Cancer Res Commun· January 2024

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Correction: Candidate variants in DNA replication and repair genes in early-onset renal cell carcinoma patients referred for germline testing.
Elena V Demidova, Ilya G Serebriiskii, Ramilia Vlasenkova, Simon Kelow, Mark D Andrake

BMC Genomics· July 2023

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Candidate variants in DNA replication and repair genes in early-onset renal cell carcinoma patients referred for germline testing.
Elena V Demidova, Ilya G Serebriiskii, Ramilia Vlasenkova, Simon Kelow, Mark D Andrake

BMC Genomics· April 2023

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Investigation of the causal etiology in a patient with T-B+NK+ immunodeficiency.
Robert Sertori, Jian-Xin Lin, Esteban Martinez, Sadhna Rana, Andrew Sharo, Mark Andrake

Front Immunol· August 2022

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Radiation activates myeloperoxidase (MPO) to generate active chlorine species (ACS) via a dephosphorylation mechanism - inhibitory effect of LGM2605.
Om P Mishra, Anatoliy V Popov, Ralph A Pietrofesa, Wei-Ting Hwang, Mark Andrake

Biochim Biophys Acta Gen Subj· July 2020

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Protein modeling to assess the pathogenicity of rare variants of SERPINA1 in patients suspected of having Alpha 1 Antitrypsin Deficiency.
Friedrich Kueppers, Mark D Andrake, Qifang Xu, Roland L Dunbrack, Joannah Kim

BMC Med Genet· July 2019

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Mouse modeling and structural analysis of the p.G307S mutation in human cystathionine β-synthase () reveal effects on CBS activity but not stability.
Sapna Gupta, Simon Kelow, Liqun Wang, Mark D Andrake, Roland L Dunbrack

J Biol Chem· September 2018

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Synthetic secoisolariciresinol diglucoside (LGM2605) inhibits myeloperoxidase activity in inflammatory cells.
Om P Mishra, Anatoliy V Popov, Ralph A Pietrofesa, Eiko Nakamaru-Ogiso, Mark Andrake

Biochim Biophys Acta Gen Subj· June 2018

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Plk2 Loss Commonly Occurs in Colorectal Carcinomas but not Adenomas: Relationship to mTOR Signaling.
Elizabeth M Matthew, Zhaohai Yang, Suraj Peri, Mark Andrake, Roland Dunbrack

Neoplasia· March 2018

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The conformational feasibility for the formation of reaching dimer in ASV and HIV integrase: a molecular dynamics study.
Sangeetha Balasubramanian, Muthukumaran Rajagopalan, Ravi Shankar Bojja, Anna Marie Skalka, Mark D Andrake

J Biomol Struct Dyn· December 2017

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Successes and challenges with retroviral enzymes.
Anna Marie Skalka, Mark D Andrake, Richard A Katz

Postepy Biochem· December 2017

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BRCA2, EGFR, and NTRK mutations in mismatch repair-deficient colorectal cancers with MSH2 or MLH1 mutations.
Safoora Deihimi, Avital Lev, Michael Slifker, Elena Shagisultanova, Qifang Xu, Mark Andrake

Oncotarget· June 2017

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DAI Senses Influenza A Virus Genomic RNA and Activates RIPK3-Dependent Cell Death.
Roshan J Thapa, Justin P Ingram, Katherine B Ragan, Shoko Nogusa, David F Boyd, Mark Andrake

Cell Host Microbe· November 2016

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Biological function derived from predicted structures in CASP11.
Peter J Huwe, Qifang Xu, Maxim V Shapovalov, Vivek Modi, Mark D Andrake

Proteins· September 2016

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Systematic evaluation of underlying defects in DNA repair as an approach to case-only assessment of familial prostate cancer.
Emmanuelle Nicolas, Sanjeevani Arora, Yan Zhou, Ilya G Serebriiskii, Mark D Andrake

Oncotarget· November 2015

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Small-Molecule Disruption of RAD52 Rings as a Mechanism for Precision Medicine in BRCA-Deficient Cancers.
Gurushankar Chandramouly, Shane McDevitt, Katherine Sullivan, Tatiana Kent, Antonio Luz, Mark Andrake

Chem Biol· November 2015

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Retroviral Integrase: Then and Now.
Mark D Andrake, Anna Marie Skalka

Annu Rev Virol· November 2015

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