Publications by authors named "Matthew A Gitzendanner"

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Development of an efficient CRISPR-mediated genome editing platform in the diploid-polyploid model system Tragopogon (Asteraceae).
Shengchen Shan, Michael T Pisias, Zhengzhi Zhang, Evgeny V Mavrodiev, Matthew A Gitzendanner

J Exp Bot· December 2025

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Combined impact of semantic segmentation and quantitative structure modelling of Southern pine trees using terrestrial laser scanning.
Jinyi Xia, Timothy A Martin, Gary F Peter, Kody M Brock, Jeff W Atkins, Matthew A Gitzendanner

Sci Rep· July 2025

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Genome-wide DNA methylation dynamics following recent polyploidy in the allotetraploid Tragopogon miscellus (Asteraceae).
Shengchen Shan, Matthew A Gitzendanner, J Lucas Boatwright, Jonathan P Spoelhof, Christina L Ethridge

New Phytol· May 2024

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Abundant incongruence in a clade endemic to a biodiversity hotspot: Phylogenetics of the scrub mint clade (Lamiaceae).
Andre A Naranjo, Christine E Edwards, Matthew A Gitzendanner, Douglas E Soltis, Pamela S Soltis

Mol Phylogenet Evol· March 2024

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Phylogenetic diversity of eastern Asia-eastern North America disjunct plants is mainly associated with divergence time.
Han-Yang Lin, Miao Sun, Ya-Jun Hao, Daijiang Li, Matthew A Gitzendanner

Plant Divers· January 2023

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Plastid phylogenomic insights into relationships of all flowering plant families.
Hong-Tao Li, Yang Luo, Lu Gan, Peng-Fei Ma, Lian-Ming Gao, Matthew A Gitzendanner

BMC Biol· October 2021

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Green giant-a tiny chloroplast genome with mighty power to produce high-value proteins: history and phylogeny.
Henry Daniell, Shuangxia Jin, Xin-Guang Zhu, Matthew A Gitzendanner, Douglas E Soltis

Plant Biotechnol J· March 2021

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A new, simple, highly scalable, and efficient protocol for genomic DNA extraction from diverse plant taxa.
Evgeny V Mavrodiev, Christopher Dervinis, William Mark Whitten, Matthew A Gitzendanner, Matias Kirst

Appl Plant Sci· March 2021

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Genetic insights into the evolution of genera with the eastern Asia-eastern North America floristic disjunction: a transcriptomics analysis.
Anthony E Melton, Shichao Chen, Yunpeng Zhao, Chengxin Fu, Qiu-Yun Jenny Xiang, Matthew A Gitzendanner

Am J Bot· December 2020

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Investigating the gene expression profiles of rehabilitated Florida manatees (Trichechus manatus latirostris) following red tide exposure.
Rebecca Lazensky, Margaret E Hunter, David Moraga Amador, Basima Al-Khedery, Fahong Yu, Matthew A Gitzendanner

PLoS One· September 2020

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Recent accelerated diversification in rosids occurred outside the tropics.
Miao Sun, Ryan A Folk, Matthew A Gitzendanner, Pamela S Soltis, Zhiduan Chen

Nat Commun· July 2020

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Estimating rates and patterns of diversification with incomplete sampling: a case study in the rosids.
Miao Sun, Ryan A Folk, Matthew A Gitzendanner, Pamela S Soltis, Zhiduan Chen

Am J Bot· June 2020

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Nuclear phylogenomic analyses of asterids conflict with plastome trees and support novel relationships among major lineages.
Gregory W Stull, Pamela S Soltis, Douglas E Soltis, Matthew A Gitzendanner, Stephen A Smith

Am J Bot· May 2020

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Genetic relationships and polyploid origins in the Lippia alba complex.
Juliana M L Lopes, Humberto Henrique de Carvalho, Cristiane Zorzatto, Ana Luisa S Azevedo, Marco Antonio Machado, Matthew A Gitzendanner

Am J Bot· March 2020

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Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP).
Eric J Carpenter, Naim Matasci, Saravanaraj Ayyampalayam, Shuangxiu Wu, Jing Sun, Matthew A Gitzendanner

Gigascience· October 2019

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Genome-wide association analysis of common genetic variants of resistant hypertension.
Nihal El Rouby, Caitrin W McDonough, Yan Gong, Leslie A McClure, Braxton D Mitchell, Matthew A Gitzendanner

Pharmacogenomics J· June 2019

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Origin of angiosperms and the puzzle of the Jurassic gap.
Hong-Tao Li, Ting-Shuang Yi, Lian-Ming Gao, Peng-Fei Ma, Ting Zhang, Matthew A Gitzendanner

Nat Plants· May 2019

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Evolutionary insights from comparative transcriptome and transcriptome-wide coalescence analyses in Tetrastigma hemsleyanum.
Yihan Wang, Weimei Jiang, Wenqing Ye, Chengxin Fu, Matthew A Gitzendanner

BMC Plant Biol· September 2018

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Linking genome signatures of selection and adaptation in non-model plants: exploring potential and limitations in the angiosperm Amborella.
Richard Gj Hodel, Luke M Chandler, Annette M Fahrenkrog, Matias Kirst, Matthew A Gitzendanner

Curr Opin Plant Biol· April 2018

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Plastid phylogenomic analysis of green plants: A billion years of evolutionary history.
Matthew A Gitzendanner, Pamela S Soltis, Gane K-S Wong, Brad R Ruhfel, Douglas E Soltis

Am J Bot· March 2018

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Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae).
Nicolás García, Ryan A Folk, Alan W Meerow, Srikar Chamala, Matthew A Gitzendanner

Mol Phylogenet Evol· June 2017

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A new resource for the development of SSR markers: Millions of loci from a thousand plant transcriptomes.
Richard G J Hodel, Matthew A Gitzendanner, Charlotte C Germain-Aubrey, Xiaoxian Liu, Andrew A Crowl

Appl Plant Sci· June 2016

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The report of my death was an exaggeration: A review for researchers using microsatellites in the 21st century.
Richard G J Hodel, M Claudia Segovia-Salcedo, Jacob B Landis, Andrew A Crowl, Miao Sun, Matthew A Gitzendanner

Appl Plant Sci· June 2016

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Are microsatellite fragment lengths useful for population-level studies? The case of Polygala lewtonii (Polygalaceae).
Charlotte C Germain-Aubrey, Cory Nelson, Douglas E Soltis, Pamela S Soltis, Matthew A Gitzendanner

Appl Plant Sci· February 2016

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The Phenotypic and Genetic Underpinnings of Flower Size in Polemoniaceae.
Jacob B Landis, Rebecca D O'Toole, Kayla L Ventura, Matthew A Gitzendanner, David G Oppenheimer

Front Plant Sci· January 2016

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