Publications by authors named "Matthieu Hainaut"

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Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus.
Shingo Miyauchi, Hayat Hage, Elodie Drula, Laurence Lesage-Meessen, Jean-Guy Berrin, Matthieu Hainaut

DNA Res· April 2020

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Poplar carbohydrate-active enzymes: whole-genome annotation and functional analyses based on RNA expression data.
Vikash Kumar, Matthieu Hainaut, Nicolas Delhomme, Chanaka Mannapperuma, Peter Immerzeel

Plant J· August 2019

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High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis.
Eric C H Chen, Emmanuelle Morin, Denis Beaudet, Jessica Noel, Gokalp Yildirir, Matthieu Hainaut

New Phytol· December 2018

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Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri.
Tammi C Vesth, Jane L Nybo, Sebastian Theobald, Jens C Frisvad, Thomas O Larsen, Matthieu Hainaut

Nat Genet· December 2018

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Rapid Divergence of Genome Architectures Following the Origin of an Ectomycorrhizal Symbiosis in the Genus Amanita.
Jaqueline Hess, Inger Skrede, Maryam Chaib De Mares, Matthieu Hainaut, Bernard Henrissat

Mol Biol Evol· November 2018

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Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina.
Teeratas Kijpornyongpan, Stephen J Mondo, Kerrie Barry, Laura Sandor, Juna Lee, Matthieu Hainaut

Mol Biol Evol· August 2018

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Integrative visual omics of the white-rot fungus exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass.
Shingo Miyauchi, Anaïs Rancon, Elodie Drula, Hayat Hage, Delphine Chaduli, Matthieu Hainaut

Biotechnol Biofuels· July 2018

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Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga.
Miia R Mäkelä, Mao Peng, Zoraide Granchi, Thomas Chin-A-Woeng, Rosa Hegi, Matthieu Hainaut

Genome Announc· April 2018

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Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi.
Dániel G Knapp, Julianna B Németh, Kerrie Barry, Matthieu Hainaut, Bernard Henrissat

Sci Rep· April 2018

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Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes.
Mao Peng, Maria Victoria Aguilar-Pontes, Matthieu Hainaut, Bernard Henrissat, Kristiina Hildén

Fungal Genet Biol· March 2018

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Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists.
Elena Martino, Emmanuelle Morin, Gwen-Aëlle Grelet, Alan Kuo, Annegret Kohler, Matthieu Hainaut

New Phytol· February 2018

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A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9.
Nicolas Lenfant, Matthieu Hainaut, Nicolas Terrapon, Elodie Drula, Vincent Lombard

Carbohydr Res· August 2017

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Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters.
Jean-Félix Dallery, Nicolas Lapalu, Antonios Zampounis, Sandrine Pigné, Isabelle Luyten, Matthieu Hainaut

BMC Genomics· August 2017

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Genome Assembly of the Fungus Cochliobolus miyabeanus, and Transcriptome Analysis during Early Stages of Infection on American Wildrice (Zizania palustris L.).
Claudia V Castell-Miller, Juan J Gutierrez-Gonzalez, Zheng Jin Tu, Kathryn E Bushley, Matthieu Hainaut

PLoS One· July 2017

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A parts list for fungal cellulosomes revealed by comparative genomics.
Charles H Haitjema, Sean P Gilmore, John K Henske, Kevin V Solomon, Randall de Groot, Matthieu Hainaut

Nat Microbiol· May 2017

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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi.
Mao Peng, Adiphol Dilokpimol, Miia R Mäkelä, Kristiina Hildén, Sander Bervoets, Matthieu Hainaut

J Biotechnol· March 2017

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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
Ronald P de Vries, Robert Riley, Ad Wiebenga, Guillermo Aguilar-Osorio, Sotiris Amillis, Matthieu Hainaut

Genome Biol· February 2017

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Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles.
Markus Schlegel, Martin Münsterkötter, Ulrich Güldener, Rémy Bruggmann, Angelo Duò, Matthieu Hainaut

BMC Genomics· December 2016

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Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2.
Otto Miettinen, Robert Riley, Kerrie Barry, Dan Cullen, Ronald P de Vries, Matthieu Hainaut

Genome Announc· September 2016

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Erratum: Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi.
Stéphane Hacquard, Barbara Kracher, Kei Hiruma, Philipp C Münch, Ruben Garrido-Oter, Matthieu Hainaut

Nat Commun· September 2016

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Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential.
Vanessa Rédou, Abhishek Kumar, Matthieu Hainaut, Bernard Henrissat, Eric Record

Genome Announc· July 2016

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Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential.
Vanessa Rédou, Abhishek Kumar, Matthieu Hainaut, Bernard Henrissat, Eric Record

Genome Announc· July 2016

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Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi.
Stéphane Hacquard, Barbara Kracher, Kei Hiruma, Philipp C Münch, Ruben Garrido-Oter, Matthieu Hainaut

Nat Commun· May 2016

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The genome of Xylona heveae provides a window into fungal endophytism.
Romina Gazis, Alan Kuo, Robert Riley, Kurt LaButti, Anna Lipzen, Matthieu Hainaut

Fungal Biol· January 2016

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A flexible extension of the Drosophila ultrabithorax homeodomain defines a novel Hox/PBC interaction mode.
Nicolas Foos, Corinne Maurel-Zaffran, María Jesús Maté, Renaud Vincentelli, Matthieu Hainaut

Structure· February 2015

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