Publications by authors named "Michael Capp"

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The mechanism and high-free-energy transition state of lac repressor-lac operator interaction.
Rituparna Sengupta, Michael W Capp, Irina A Shkel, M Thomas Record

Nucleic Acids Res· December 2017

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Fluorescence Resonance Energy Transfer Characterization of DNA Wrapping in Closed and Open Escherichia coli RNA Polymerase-λP(R) Promoter Complexes.
Raashi Sreenivasan, Sara Heitkamp, Munish Chhabra, Ruth Saecker, Emily Lingeman, Michael W Capp

Biochemistry· April 2016

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E. coli RNA Polymerase Determinants of Open Complex Lifetime and Structure.
Emily F Ruff, Amanda C Drennan, Michael W Capp, Mikaela A Poulos, Irina Artsimovitch

J Mol Biol· July 2015

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Quantifying additive interactions of the osmolyte proline with individual functional groups of proteins: comparisons with urea and glycine betaine, interpretation of m-values.
Roger C Diehl, Emily J Guinn, Michael W Capp, Oleg V Tsodikov, M Thomas Record

Biochemistry· September 2013

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Introductory lecture: interpreting and predicting Hofmeister salt ion and solute effects on biopolymer and model processes using the solute partitioning model.
M Thomas Record, Emily Guinn, Laurel Pegram, Michael Capp

Faraday Discuss· July 2013

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Key roles of the downstream mobile jaw of Escherichia coli RNA polymerase in transcription initiation.
Amanda Drennan, Mark Kraemer, Michael Capp, Theodore Gries, Emily Ruff

Biochemistry· November 2012

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Quantifying why urea is a protein denaturant, whereas glycine betaine is a protein stabilizer.
Emily J Guinn, Laurel M Pegram, Michael W Capp, Michelle N Pollock, M Thomas Record

Proc Natl Acad Sci U S A· October 2011

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One-step DNA melting in the RNA polymerase cleft opens the initiation bubble to form an unstable open complex.
Theodore J Gries, Wayne S Kontur, Michael W Capp, Ruth M Saecker, M Thomas Record

Proc Natl Acad Sci U S A· June 2010

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Probing DNA binding, DNA opening, and assembly of a downstream clamp/jaw in Escherichia coli RNA polymerase-lambdaP(R) promoter complexes using salt and the physiological anion glutamate.
Wayne S Kontur, Michael W Capp, Theodore J Gries, Ruth M Saecker, M Thomas Record

Biochemistry· May 2010

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Interactions of the osmolyte glycine betaine with molecular surfaces in water: thermodynamics, structural interpretation, and prediction of m-values.
Michael W Capp, Laurel M Pegram, Ruth M Saecker, Megan Kratz, Demian Riccardi

Biochemistry· November 2009

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Late steps in the formation of E. coli RNA polymerase-lambda P R promoter open complexes: characterization of conformational changes by rapid [perturbant] upshift experiments.
Wayne S Kontur, Ruth M Saecker, Michael W Capp, M Thomas Record

J Mol Biol· February 2008

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Solute probes of conformational changes in open complex (RPo) formation by Escherichia coli RNA polymerase at the lambdaPR promoter: evidence for unmasking of the active site in the isomerization step and for large-scale coupled folding in the subsequent conversion to RPo.
Wayne S Kontur, Ruth M Saecker, Caroline A Davis, Michael W Capp, M Thomas Record

Biochemistry· February 2006

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The effects of upstream DNA on open complex formation by Escherichia coli RNA polymerase.
Caroline A Davis, Michael W Capp, M Thomas Record, Ruth M Saecker

Proc Natl Acad Sci U S A· January 2005

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The exclusion of glycine betaine from anionic biopolymer surface: why glycine betaine is an effective osmoprotectant but also a compatible solute.
Daniel J Felitsky, Jonathan G Cannon, Michael W Capp, Jiang Hong, Adam W Van Wynsberghe

Biochemistry· November 2004

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Preferential interactions of glycine betaine and of urea with DNA: implications for DNA hydration and for effects of these solutes on DNA stability.
Jiang Hong, Michael W Capp, Charles F Anderson, Ruth M Saecker, Daniel J Felitsky

Biochemistry· November 2004

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Rapid quench mixing to quantify kinetics of steps in association of Escherichia coli RNA polymerase with promoter DNA.
Ruth M Saecker, Oleg V Tsodikov, Michael W Capp, M Thomas Record

Methods Enzymol· February 2004

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Preferential interactions in aqueous solutions of urea and KCl.
Jiang Hong, Michael W Capp, Charles F Anderson, M Thomas Record

Biophys Chem· September 2003

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Kinetic studies and structural models of the association of E. coli sigma(70) RNA polymerase with the lambdaP(R) promoter: large scale conformational changes in forming the kinetically significant intermediates.
Ruth M Saecker, Oleg V Tsodikov, Kristi L McQuade, Peter E Schlax, Michael W Capp

J Mol Biol· June 2002

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