Publications by authors named "Nir Piterman"

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Modelling and verification of reconfigurable multi-agent systems.
Yehia Abd Alrahman, Nir Piterman

Auton Agent Multi Agent Syst· August 2021

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Heterogeneity of Myc expression in breast cancer exposes pharmacological vulnerabilities revealed through executable mechanistic modeling.
Peter Kreuzaler, Matthew A Clarke, Elizabeth J Brown, Catherine H Wilson, Roderik M Kortlever, Nir Piterman

Proc Natl Acad Sci U S A· October 2019

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A toolbox for discrete modelling of cell signalling dynamics.
Yasmin Z Paterson, David Shorthouse, Markus W Pleijzier, Nir Piterman, Claus Bendtsen

Integr Biol (Camb)· June 2018

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SCNS: a graphical tool for reconstructing executable regulatory networks from single-cell genomic data.
Steven Woodhouse, Nir Piterman, Christoph M Wintersteiger, Berthold Göttgens, Jasmin Fisher

BMC Syst Biol· May 2018

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BTR: training asynchronous Boolean models using single-cell expression data.
Chee Yee Lim, Huange Wang, Steven Woodhouse, Nir Piterman, Lorenz Wernisch

BMC Bioinformatics· September 2016

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Emergent stem cell homeostasis in the C. elegans germline is revealed by hybrid modeling.
Benjamin A Hall, Nir Piterman, Alex Hajnal, Jasmin Fisher

Biophys J· July 2015

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Decoding the regulatory network of early blood development from single-cell gene expression measurements.
Victoria Moignard, Steven Woodhouse, Laleh Haghverdi, Andrew J Lilly, Yosuke Tanaka, Nir Piterman

Nat Biotechnol· March 2015

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Drug target optimization in chronic myeloid leukemia using innovative computational platform.
Ryan Chuang, Benjamin A Hall, David Benque, Byron Cook, Samin Ishtiaq, Nir Piterman

Sci Rep· February 2015

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Toward synthesizing executable models in biology.
Jasmin Fisher, Nir Piterman, Rastislav Bodik

Front Bioeng Biotechnol· January 2015

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A dynamic physical model of cell migration, differentiation and apoptosis in Caenorhabditis elegans.
Antje Beyer, Ralf Eberhard, Nir Piterman, Michael O Hengartner, Alex Hajnal

Adv Exp Med Biol· January 2013

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Cell-cycle regulation of NOTCH signaling during C. elegans vulval development.
Stefanie Nusser-Stein, Antje Beyer, Ivo Rimann, Magdalene Adamczyk, Nir Piterman

Mol Syst Biol· January 2013

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The executable pathway to biological networks.
Jasmin Fisher, Nir Piterman

Brief Funct Genomics· January 2010

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Computational modeling of the EGFR network elucidates control mechanisms regulating signal dynamics.
Dennis Y Q Wang, Luca Cardelli, Andrew Phillips, Nir Piterman, Jasmin Fisher

BMC Syst Biol· December 2009

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Predictive modeling of signaling crosstalk during C. elegans vulval development.
Jasmin Fisher, Nir Piterman, Alex Hajnal, Thomas A Henzinger

PLoS Comput Biol· May 2007

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Computational insights into Caenorhabditis elegans vulval development.
Jasmin Fisher, Nir Piterman, E Jane Albert Hubbard, Michael J Stern, David Harel

Proc Natl Acad Sci U S A· February 2005

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