Publications by authors named "Oliver Smart"

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PDBe CCDUtils: an RDKit-based toolkit for handling and analysing small molecules in the Protein Data Bank.
Ibrahim Roshan Kunnakkattu, Preeti Choudhary, Lukas Pravda, Nurul Nadzirin, Oliver S Smart

J Cheminform· December 2023

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Enhanced validation of small-molecule ligands and carbohydrates in the Protein Data Bank.
Zukang Feng, John D Westbrook, Raul Sala, Oliver S Smart, Gérard Bricogne

Structure· April 2021

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Aquaglyceroporin-3's Expression and Cellular Localization Is Differentially Modulated by Hypoxia in Prostate Cancer Cell Lines.
Andreia de Almeida, Dimitris Parthimos, Holly Dew, Oliver Smart, Marie Wiltshire

Cells· April 2021

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PDBe: improved findability of macromolecular structure data in the PDB.
David R Armstrong, John M Berrisford, Matthew J Conroy, Aleksandras Gutmanas, Stephen Anyango, Oliver Smart

Nucleic Acids Res· January 2020

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Validation of ligands in macromolecular structures determined by X-ray crystallography.
Oliver S Smart, Vladimír Horský, Swanand Gore, Radka Svobodová Vařeková, Veronika Bendová

Acta Crystallogr D Struct Biol· March 2018

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Worldwide Protein Data Bank validation information: usage and trends.
Oliver S Smart, Vladimír Horský, Swanand Gore, Radka Svobodová Vařeková, Veronika Bendová

Acta Crystallogr D Struct Biol· March 2018

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PDBe: towards reusable data delivery infrastructure at protein data bank in Europe.
Saqib Mir, Younes Alhroub, Stephen Anyango, David R Armstrong, John M Berrisford, Oliver S Smart

Nucleic Acids Res· January 2018

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Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data.
Jasmine Y Young, John D Westbrook, Zukang Feng, Ezra Peisach, Irina Persikova, Oliver S Smart

Database (Oxford)· January 2018

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Validation of Structures in the Protein Data Bank.
Swanand Gore, Eduardo Sanz García, Pieter M S Hendrickx, Aleksandras Gutmanas, John D Westbrook, Oliver S Smart

Structure· December 2017

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Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop.
Paul D Adams, Kathleen Aertgeerts, Cary Bauer, Jeffrey A Bell, Helen M Berman, Oliver Smart

Structure· April 2016

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PDBe: improved accessibility of macromolecular structure data from PDB and EMDB.
Sameer Velankar, Glen van Ginkel, Younes Alhroub, Gary M Battle, John M Berrisford, Oliver S Smart

Nucleic Acids Res· January 2016

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Self-assembly of a giant molecular Solomon link from 30 subcomponents.
Clément Schouwey, Julian J Holstein, Rosario Scopelliti, Konstantin O Zhurov, Konstantin O Nagornov, Oliver S Smart

Angew Chem Int Ed Engl· October 2014

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Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER.
Oliver S Smart, Thomas O Womack, Claus Flensburg, Peter Keller, Włodek Paciorek

Acta Crystallogr D Biol Crystallogr· April 2012

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Data processing and analysis with the autoPROC toolbox.
Clemens Vonrhein, Claus Flensburg, Peter Keller, Andrew Sharff, Oliver Smart

Acta Crystallogr D Biol Crystallogr· April 2011

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The SARS-unique domain (SUD) of SARS coronavirus contains two macrodomains that bind G-quadruplexes.
Jinzhi Tan, Clemens Vonrhein, Oliver S Smart, Gerard Bricogne, Michela Bollati

PLoS Pathog· May 2009

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Structural enzymological studies of 2-enoyl thioester reductase of the human mitochondrial FAS II pathway: new insights into its substrate recognition properties.
Zhi-Jun Chen, Regina Pudas, Satyan Sharma, Oliver S Smart, André H Juffer

J Mol Biol· June 2008

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Reversible photocontrol of DNA binding by a designed GCN4-bZIP protein.
G Andrew Woolley, Anna S I Jaikaran, Maxim Berezovski, Joseph P Calarco, Sergey N Krylov, Oliver S Smart

Biochemistry· May 2006

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Photochemical regulation of DNA-binding specificity of MyoD.
Lucia Guerrero, Oliver S Smart, Chris J Weston, Darcy C Burns, G Andrew Woolley

Angew Chem Int Ed Engl· December 2005

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De novo design of a stable N-terminal helical foldamer.
Andrew J Nicoll, Chris J Weston, Charley Cureton, Christian Ludwig, Felican Dancea, Oliver S Smart

Org Biomol Chem· December 2005

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Photocontrol of DNA binding specificity of a miniature engrailed homeodomain.
Lucia Guerrero, Oliver S Smart, G Andrew Woolley, Rudolf K Allemann

J Am Chem Soc· November 2005

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Origins of helix-coil switching in a light-sensitive peptide.
Darcy C Burns, Daniel G Flint, Janet R Kumita, Howard J Feldman, Luis Serrano, Oliver S Smart

Biochemistry· December 2004

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A stable miniature protein with oxaloacetate decarboxylase activity.
Chris J Weston, Charly H Cureton, Melanie J Calvert, Oliver S Smart, Rudolf K Allemann

Chembiochem· August 2004

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A water-soluble azobenzene cross-linker for photocontrol of peptide conformation.
Zhihua Zhang, Darcy C Burns, Janet R Kumita, Oliver S Smart, G Andrew Woolley

Bioconjug Chem· March 2004

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Controlling the DNA binding specificity of bHLH proteins through intramolecular interactions.
Elizebeth C Turner, Charlotte H Cureton, Chris J Weston, Oliver S Smart, Rudolf K Allemann

Chem Biol· January 2004

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Prevention of peptide fibril formation in an aqueous environment by mutation of a single residue to Aib.
Janet R Kumita, Chris J Weston, Lin-P'ing Choo-Smith, G Andrew Woolley, Oliver S Smart

Biochemistry· April 2003

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