Publications by authors named "Roderick Docking"

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Loss of FBXO11 establishes a stem cell program in acute myeloid leukemia by dysregulating LONP1.
Hayle Kincross, Ya-Chi Angela Mo, Xuan Wang, Linda Chang, Gerben Duns, T Roderick Docking

J Clin Invest· November 2025

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Control of focal adhesion kinase activation by RUNX1-regulated miRNAs in high-risk AML.
Vijay Suresh Akhade, Tian Liu, T Roderick Docking, Jihong Jiang, Aparna Gopal

Leukemia· April 2023

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Assessing Limit of Detection in Clinical Sequencing.
Elizabeth R Starks, Lucas Swanson, T Roderick Docking, Ian Bosdet, Sarah Munro

J Mol Diagn· April 2021

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A clinical transcriptome approach to patient stratification and therapy selection in acute myeloid leukemia.
T Roderick Docking, Jeremy D K Parker, Martin Jädersten, Gerben Duns, Linda Chang

Nat Commun· April 2021

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Altered microRNA expression links IL6 and TNF-induced inflammaging with myeloid malignancy in humans and mice.
Jennifer M Grants, Joanna Wegrzyn, Tony Hui, Kieran O'Neill, Marion Shadbolt, T Roderick Docking

Blood· June 2020

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Loss of lenalidomide-induced megakaryocytic differentiation leads to therapy resistance in del(5q) myelodysplastic syndrome.
Sergio Martinez-Høyer, Yu Deng, Jeremy Parker, Jihong Jiang, Angela Mo, T Roderick Docking

Nat Cell Biol· May 2020

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Sample Tracking Using Unique Sequence Controls.
Richard A Moore, Thomas Zeng, T Roderick Docking, Ian Bosdet, Yaron S Butterfield

J Mol Diagn· February 2020

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Fixation Effects on Variant Calling in a Clinical Resequencing Panel.
Jeremy D K Parker, Shyong Quin Yap, Elizabeth Starks, Jillian Slind, Lucas Swanson, T Roderick Docking

J Mol Diagn· July 2019

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Genomic testing in myeloid malignancy.
T Roderick Docking, Aly Karsan

Int J Lab Hematol· May 2019

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Applications of Bayesian network models in predicting types of hematological malignancies.
Rupesh Agrahari, Amir Foroushani, T Roderick Docking, Linda Chang, Gerben Duns

Sci Rep· May 2018

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Large-scale gene network analysis reveals the significance of extracellular matrix pathway and homeobox genes in acute myeloid leukemia: an introduction to the Pigengene package and its applications.
Amir Foroushani, Rupesh Agrahari, Roderick Docking, Linda Chang, Gerben Duns

BMC Med Genomics· March 2017

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Kleat: cleavage site analysis of transcriptomes.
Inanç Birol, Anthony Raymond, Readman Chiu, Ka Ming Nip, Shaun D Jackman, T Roderick Docking

Pac Symp Biocomput· April 2016

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A clinically validated diagnostic second-generation sequencing assay for detection of hereditary BRCA1 and BRCA2 mutations.
Ian E Bosdet, T Roderick Docking, Yaron S Butterfield, Andrew J Mungall, Thomas Zeng

J Mol Diagn· November 2013

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Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies.
Lucas Swanson, Gordon Robertson, Karen L Mungall, Yaron S Butterfield, Readman Chiu, T Roderick Docking

BMC Genomics· August 2013

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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.
Keith R Bradnam, Joseph N Fass, Anton Alexandrov, Paul Baranay, Michael Bechner, T Roderick Docking

Gigascience· July 2013

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Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine (Pinus banksiana).
Dawn E Hall, Macaire M S Yuen, Sharon Jancsik, Alfonso Lara Quesada, Harpreet K Dullat, Roderick T Docking

BMC Plant Biol· May 2013

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Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major forest pest.
Christopher I Keeling, Macaire M S Yuen, Nancy Y Liao, T Roderick Docking, Simon K Chan

Genome Biol· March 2013

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Transcriptome and full-length cDNA resources for the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major insect pest of pine forests.
Christopher I Keeling, Hannah Henderson, Maria Li, Mack Yuen, Erin L Clark, T Roderick Docking

Insect Biochem Mol Biol· August 2012

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Assemblathon 1: a competitive assessment of de novo short read assembly methods.
Dent Earl, Keith Bradnam, John St John, Aaron Darling, Dawei Lin, T Roderick Docking

Genome Res· December 2011

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Updated genome assembly and annotation of Paenibacillus larvae, the agent of American foulbrood disease of honey bees.
Queenie W T Chan, R Scott Cornman, Inanc Birol, Nancy Y Liao, Simon K Chan, T Roderick Docking

BMC Genomics· September 2011

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Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen.
Scott DiGuistini, Ye Wang, Nancy Y Liao, Greg Taylor, Philippe Tanguay, Roderick T Docking

Proc Natl Acad Sci U S A· February 2011

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Gene discovery for the bark beetle-vectored fungal tree pathogen Grosmannia clavigera.
Uljana Hesse-Orce, Scott DiGuistini, Christopher I Keeling, Ye Wang, Maria Li, T Roderick Docking

BMC Genomics· October 2010

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A regulatory toolbox of MiniPromoters to drive selective expression in the brain.
Elodie Portales-Casamar, Douglas J Swanson, Li Liu, Charles N de Leeuw, Kathleen G Banks, T Roderick Docking

Proc Natl Acad Sci U S A· September 2010

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De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data.
Scott Diguistini, Nancy Y Liao, Darren Platt, Gordon Robertson, Michael Seidel, T Roderick Docking

Genome Biol· February 2010

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Retrotransposon sequence variation in four asexual plant species.
T Roderick Docking, Fabienne E Saadé, Miranda C Elliott, Daniel J Schoen

J Mol Evol· April 2006

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