Publications by authors named "Thomas Zeng"

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Trifluoromethylation of 2D Transition Metal Dichalcogenides: A Mild Functionalization and Tunable p-Type Doping Method.
Brendan Kerwin, Stephanie E Liu, Tumpa Sadhukhan, Anushka Dasgupta, Leighton O Jones, Thomas T Zeng

Angew Chem Int Ed Engl· May 2024

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Direct Characterization of Buried Interfaces in 2D/3D Heterostructures Enabled by GeO Release Layer.
Christopher M Smyth, John M Cain, Alex Boehm, James A Ohlhausen, Mila Nhu Lam, Thomas T Zeng

ACS Appl Mater Interfaces· January 2024

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Sample Tracking Using Unique Sequence Controls.
Richard A Moore, Thomas Zeng, T Roderick Docking, Ian Bosdet, Yaron S Butterfield

J Mol Diagn· February 2020

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Interfaces of Malignant and Immunologic Clonal Dynamics in Ovarian Cancer.
Allen W Zhang, Andrew McPherson, Katy Milne, David R Kroeger, Phineas T Hamilton, Thomas Zeng

Cell· June 2018

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Divergent clonal selection dominates medulloblastoma at recurrence.
A Sorana Morrissy, Livia Garzia, David J H Shih, Scott Zuyderduyn, Xi Huang, Thomas Zeng

Nature· January 2016

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MEN1 mutations in Hürthle cell (oncocytic) thyroid carcinoma.
Katayoon Kasaian, Ana-Maria Chindris, Sam M Wiseman, Karen L Mungall, Thomas Zeng

J Clin Endocrinol Metab· April 2015

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Clonal analysis via barcoding reveals diverse growth and differentiation of transplanted mouse and human mammary stem cells.
Long V Nguyen, Maisam Makarem, Annaick Carles, Michelle Moksa, Nagarajan Kannan, Thomas Zeng

Cell Stem Cell· February 2014

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A clinically validated diagnostic second-generation sequencing assay for detection of hereditary BRCA1 and BRCA2 mutations.
Ian E Bosdet, T Roderick Docking, Yaron S Butterfield, Andrew J Mungall, Thomas Zeng

J Mol Diagn· November 2013

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Distinct evolutionary trajectories of primary high-grade serous ovarian cancers revealed through spatial mutational profiling.
Ali Bashashati, Gavin Ha, Alicia Tone, Jiarui Ding, Leah M Prentice, Thomas Zeng

J Pathol· September 2013

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Complete genomic landscape of a recurring sporadic parathyroid carcinoma.
Katayoon Kasaian, Sam M Wiseman, Nina Thiessen, Karen L Mungall, Richard D Corbett, Thomas Zeng

J Pathol· July 2013

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Mutation discovery in regions of segmental cancer genome amplifications with CoNAn-SNV: a mixture model for next generation sequencing of tumors.
Anamaria Crisan, Rodrigo Goya, Gavin Ha, Jiarui Ding, Leah M Prentice, Thomas Zeng

PLoS One· May 2013

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Clonal evolution of high-grade serous ovarian carcinoma from primary to recurrent disease.
Mauro Castellarin, Katy Milne, Thomas Zeng, Kane Tse, Michael Mayo

J Pathol· March 2013

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Use of mutation profiles to refine the classification of endometrial carcinomas.
Melissa K McConechy, Jiarui Ding, Maggie Cu Cheang, Kimberly Wiegand, Janine Senz, Thomas Zeng

J Pathol· September 2012

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The clonal and mutational evolution spectrum of primary triple-negative breast cancers.
Sohrab P Shah, Andrew Roth, Rodrigo Goya, Arusha Oloumi, Gavin Ha, Thomas Zeng

Nature· April 2012

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Identification and characterization of Hoxa9 binding sites in hematopoietic cells.
Yongsheng Huang, Kajal Sitwala, Joel Bronstein, Daniel Sanders, Monisha Dandekar, Thomas Zeng

Blood· January 2012

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Feature-based classifiers for somatic mutation detection in tumour-normal paired sequencing data.
Jiarui Ding, Ali Bashashati, Andrew Roth, Arusha Oloumi, Kane Tse, Thomas Zeng

Bioinformatics· January 2012

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Retinoblastoma-binding proteins 4 and 9 are important for human pluripotent stem cell maintenance.
Michael D O'Connor, Elizabeth Wederell, Gordon Robertson, Allen Delaney, Olena Morozova, Thomas Zeng

Exp Hematol· August 2011

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Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma.
Ryan D Morin, Maria Mendez-Lago, Andrew J Mungall, Rodrigo Goya, Karen L Mungall, Thomas Zeng

Nature· July 2011

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Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes.
René L Warren, J Douglas Freeman, Thomas Zeng, Gina Choe, Sarah Munro

Genome Res· May 2011

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Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors.
Steven Jm Jones, Janessa Laskin, Yvonne Y Li, Obi L Griffith, Jianghong An, Thomas Zeng

Genome Biol· January 2011

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Preparation and analysis of microRNA libraries using the Illumina massively parallel sequencing technology.
Ryan D Morin, Yongjun Zhao, Anna-Liisa Prabhu, Noreen Dhalla, Helen McDonald, Thomas Zeng

Methods Mol Biol· December 2010

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Alternative expression analysis by RNA sequencing.
Malachi Griffith, Obi L Griffith, Jill Mwenifumbo, Rodrigo Goya, A Sorana Morrissy, Thomas Zeng

Nat Methods· October 2010

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ARID1A mutations in endometriosis-associated ovarian carcinomas.
Kimberly C Wiegand, Sohrab P Shah, Osama M Al-Agha, Yongjun Zhao, Kane Tse, Thomas Zeng

N Engl J Med· October 2010

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The completion of the Mammalian Gene Collection (MGC).

Genome Res· December 2009

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Next-generation tag sequencing for cancer gene expression profiling.
A Sorana Morrissy, Ryan D Morin, Allen Delaney, Thomas Zeng, Helen McDonald

Genome Res· October 2009

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