Publications by authors named "Rossin Erbe"

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Epigenetic profiling reveals key super-enhancer networks driving oncogenesis in HPV-positive HNSCC.
Fernando T Zamuner, Spencer S Chan, Michael D Kessler, Ilya E Vorontsov, Andrey Loginov, Rossin Erbe

iScience· November 2025

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Development and validation of the Immune Profile Score (IPS), a novel multiomic algorithmic assay for stratifying outcomes in a real-world cohort of patients with advanced solid cancer treated with immune checkpoint inhibitors.
Alia D Zander, Rossin Erbe, Yan Liu, Ailin Jin, Seung Won Hyun

J Immunother Cancer· May 2025

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PanIN and CAF transitions in pancreatic carcinogenesis revealed with spatial data integration.
Alexander T F Bell, Jacob T Mitchell, Ashley L Kiemen, Melissa Lyman, Kohei Fujikura, Rossin Erbe

Cell Syst· August 2024

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Antibody dependent cell-mediated cytotoxicity selection pressure induces diverse mechanisms of resistance.
David J Zahavi, Rossin Erbe, Yong-Wei Zhang, Theresa Guo, Zoe X Malchiodi

Cancer Biol Ther· December 2023

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Transcriptomic forecasting with neural ordinary differential equations.
Rossin Erbe, Genevieve Stein-O'Brien, Elana J Fertig

Patterns (N Y)· August 2023

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Interrogation of T Cell-Enriched Tumors Reveals Prognostic and Immunotherapeutic Implications of Polyamine Metabolism.
R Alex Harbison, Rajeev Pandey, Michael Considine, Robert D Leone, Tracy Murray-Stewart, Rossin Erbe

Cancer Res Commun· July 2022

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The use of machine learning to discover regulatory networks controlling biological systems.
Rossin Erbe, Jessica Gore, Kelly Gemmill, Daria A Gaykalova, Elana J Fertig

Mol Cell· January 2022

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Evaluating the impact of age on immune checkpoint therapy biomarkers.
Rossin Erbe, Zheyu Wang, Sharon Wu, Joanne Xiu, Neeha Zaidi

Cell Rep· November 2021

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Evaluating the impact of age on immune checkpoint therapy biomarkers.
Rossin Erbe, Zheyu Wang, Sharon Wu, Joanne Xiu, Neeha Zaidi

Cell Rep· August 2021

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Multi-omic profiling of lung and liver tumor microenvironments of metastatic pancreatic cancer reveals site-specific immune regulatory pathways.
Won Jin Ho, Rossin Erbe, Ludmila Danilova, Zaw Phyo, Emma Bigelow

Genome Biol· May 2021

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Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma.
Theresa Guo, Kristina Diana A Zambo, Fernando T Zamuner, Tingting Ou, Christopher Hopkins, Rossin Erbe

Epigenetics· September 2020

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Matrix factorization and transfer learning uncover regulatory biology across multiple single-cell ATAC-seq data sets.
Rossin Erbe, Michael D Kessler, Alexander V Favorov, Hariharan Easwaran, Daria A Gaykalova

Nucleic Acids Res· July 2020

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