Publications by authors named "Ruining Dong"

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Whole genome sequencing improves tissue-of-origin diagnosis and treatment options for cancer of unknown primary.
Richard J Rebello, Atara Posner, Ruining Dong, Owen W J Prall, Tharani Sivakumaran

Nat Commun· May 2025

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Unravelling mutational signatures with plasma circulating tumour DNA.
Sebastian Hollizeck, Ning Wang, Stephen Q Wong, Cassandra Litchfield, Jerick Guinto, Ruining Dong

Nat Commun· November 2024

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CD4 T cell immunity against cutaneous melanoma encompasses multifaceted MHC II-dependent responses.
Emma G Bawden, Teagan Wagner, Jan Schröder, Maike Effern, Daniel Hinze, Ruining Dong

Sci Immunol· January 2024

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svaRetro and svaNUMT: modular packages for annotating retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data.
Ruining Dong, Daniel Cameron, Justin Bedo, Anthony T Papenfuss

GigaByte· October 2022

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StructuralVariantAnnotation: a R/Bioconductor foundation for a caller-agnostic structural variant software ecosystem.
Daniel L Cameron, Ruining Dong, Anthony T Papenfuss

Bioinformatics· March 2022

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tidybulk: an R tidy framework for modular transcriptomic data analysis.
Stefano Mangiola, Ramyar Molania, Ruining Dong, Maria A Doyle, Anthony T Papenfuss

Genome Biol· January 2021

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