Publications by authors named "Wilson Lo"

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Democratising high performance computing for bioinformatics through serverless cloud computing: A case study on CRISPR-Cas9 guide RNA design with Crackling Cloud.
Jacob Bradford, Divya Joy, Mattias Winsen, Nicholas Meurant, Mackenzie Wilkins

PLoS Comput Biol· December 2025

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AAVolve: Concatenated long-read deep sequencing enables whole capsid tracking during shuffled AAV library selection.
Suzanne Scott, Adrian Westhaus, Deborah Nazareth, Marti Cabanes-Creus, Renina Gale Navarro

Mol Ther Methods Clin Dev· December 2024

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Evolutionary Insights from Association Rule Mining of Co-Occurring Mutations in Influenza Hemagglutinin and Neuraminidase.
Valentina Galeone, Carol Lee, Michael T Monaghan, Denis C Bauer, Laurence O W Wilson

Viruses· September 2024

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Synsor: a tool for alignment-free detection of engineered DNA sequences.
Aidan P Tay, Kieran Didi, Anuradha Wickramarachchi, Denis C Bauer, Laurence O W Wilson

Front Bioeng Biotechnol· July 2024

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Data Visualization of CRISPR-Cas9 Guide RNA Design Tools.
Yatish Jain, Fathima Afra Mohamed Izzath, Laurence O W Wilson, Denis C Bauer

Stud Health Technol Inform· January 2024

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Scalable genomic data exchange and analytics with sBeacon.
Anuradha Wickramarachchi, Brendan Hosking, Yatish Jain, John Grimes, Mitchell J O'Brien, Florian Reisinger

Nat Biotechnol· November 2023

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Unsupervised machine learning framework for discriminating major variants of concern during COVID-19.
Rohitash Chandra, Chaarvi Bansal, Mingyue Kang, Tom Blau, Vinti Agarwal

PLoS One· May 2023

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Assessment of Pre-Clinical Liver Models Based on Their Ability to Predict the Liver-Tropism of Adeno-Associated Virus Vectors.
Adrian Westhaus, Marti Cabanes-Creus, Kimberley L Dilworth, Erhua Zhu, David Salas Gómez, Gloria González-Aseguinolaza

Hum Gene Ther· April 2023

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Identification of Protein Isoforms Using Reference Databases Built from Long and Short Read RNA-Sequencing.
Aidan P Tay, Joshua J Hamey, Gabriella E Martyn, Laurence O W Wilson, Marc R Wilkins

J Proteome Res· July 2022

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Isling: A Tool for Detecting Integration of Wild-Type Viruses and Clinical Vectors.
Suzanne Scott, Claus V Hallwirth, Felix Hartkopf, Susanna Grigson, Yatish Jain

J Mol Biol· June 2022

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A bioinformatic pipeline for simulating viral integration data.
Suzanne Scott, Susanna Grigson, Felix Hartkopf, Claus V Hallwirth, Ian E Alexander

Data Brief· June 2022

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Data-driven platform for identifying variants of interest in COVID-19 virus.
Priya Ramarao-Milne, Yatish Jain, Letitia M F Sng, Brendan Hosking, Carol Lee

Comput Struct Biotechnol J· June 2022

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Novel human liver-tropic AAV variants define transferable domains that markedly enhance the human tropism of AAV7 and AAV8.
Marti Cabanes-Creus, Renina Gale Navarro, Erhua Zhu, Grober Baltazar, Sophia H Y Liao, Loan Hanh Nguyen

Mol Ther Methods Clin Dev· March 2022

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"But Mouse, You Are Not Alone": On Some Severe Acute Respiratory Syndrome Coronavirus 2 Variants Infecting Mice.
Michael J Kuiper, Laurence O W Wilson, Shruthi Mangalaganesh, Carol Lee, Daniel Reti

ILAR J· December 2021

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Erratum to: "But Mouse, You Are Not Alone": On Some Severe Acute Respiratory Syndrome Coronavirus 2 Variants Infecting Mice.
Michael J Kuiper, Laurence O W Wilson, Shruthi Mangalaganesh, Carol Lee, Daniel Reti

ILAR J· December 2021

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Optimized nickase- and nuclease-based prime editing in human and mouse cells.
Fatwa Adikusuma, Caleb Lushington, Jayshen Arudkumar, Gelshan I Godahewa, Yu C J Chey

Nucleic Acids Res· October 2021

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Interoperable medical data: The missing link for understanding COVID-19.
Denis C Bauer, Alejandro Metke-Jimenez, Sebastian Maurer-Stroh, Suma Tiruvayipati, Laurence O W Wilson

Transbound Emerg Dis· July 2021

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Single amino acid insertion allows functional transduction of murine hepatocytes with human liver tropic AAV capsids.
Marti Cabanes-Creus, Renina Gale Navarro, Sophia H Y Liao, Grober Baltazar, Matthieu Drouyer

Mol Ther Methods Clin Dev· June 2021

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INSIDER: alignment-free detection of foreign DNA sequences.
Aidan P Tay, Brendan Hosking, Cameron Hosking, Denis C Bauer, Laurence O W Wilson

Comput Struct Biotechnol J· June 2021

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Computed Tomography-Measured Psoas Muscle Density as a Predictive Factor for Hypophosphatemia Associated With Refeeding.
Megan Ireland, Wilson Lo, Michael Villarreal, Lisa Coleman, Kathryn Schubauer

JPEN J Parenter Enteral Nutr· May 2021

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GOANA: A Universal High-Throughput Web Service for Assessing and Comparing the Outcome and Efficiency of Genome Editing Experiments.
Daniel Reti, Aidan O'Brien, Pascal Wetzel, Aidan Tay, Denis C Bauer

CRISPR J· April 2021

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A Navigation System for Base Editing: Are We There Yet?
Denis C Bauer, Laurence O W Wilson

CRISPR J· August 2020

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Supporting pandemic response using genomics and bioinformatics: A case study on the emergent SARS-CoV-2 outbreak.
Denis C Bauer, Aidan P Tay, Laurence O W Wilson, Daniel Reti, Cameron Hosking

Transbound Emerg Dis· July 2020

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VARSCOT: variant-aware detection and scoring enables sensitive and personalized off-target detection for CRISPR-Cas9.
Laurence O W Wilson, Sara Hetzel, Christopher Pockrandt, Knut Reinert, Denis C Bauer

BMC Biotechnol· June 2019

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High Activity Target-Site Identification Using Phenotypic Independent CRISPR-Cas9 Core Functionality.
Laurence O W Wilson, Daniel Reti, Aidan R O'Brien, Robert A Dunne, Denis C Bauer

CRISPR J· April 2018

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