Publications by authors named "YenYu Yang"

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Biophysical and structural mechanisms of epilepsy-associated mutations in the S4-S5 Linker of KCNQ2 channels.
Inn-Chi Lee, Yen-Yu Yang, Hsueh-Kai Chang, Swee-Hee Wong, Shi-Bing Yang

Channels (Austin)· December 2025

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COOKIE-Pro: covalent inhibitor binding kinetics profiling on the proteome scale.
Hanfeng Lin, Bin Yang, Lang Ding, Yen-Yu Yang, Matthew V Holt

Nat Commun· September 2025

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Beyond the G-Loop: CRBN Molecular Glues Potently Target VAV1 via a Novel SH3 RT-Loop Degron.
Hanfeng Lin, Xin Yu, Haiyang, Ran Cheng, Xiaoli Qi, Yen-Yu Yang

bioRxiv· June 2025

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COOKIE-Pro: Covalent Inhibitor Binding Kinetics Profiling on the Proteome Scale.
Hanfeng Lin, Bin Yang, Lang Ding, Yen-Yu Yang, Matthew V Holt

bioRxiv· June 2025

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irCLIP-RNP and Re-CLIP reveal patterns of dynamic protein assemblies on RNA.
Luca Ducoli, Brian J Zarnegar, Douglas F Porter, Robin M Meyers, Weili Miao, Yen-Yu Yang

Nature· May 2025

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Publisher Correction: irCLIP-RNP and Re-CLIP reveal patterns of dynamic protein assemblies on RNA.
Luca Ducoli, Brian J Zarnegar, Douglas F Porter, Robin M Meyers, Weili Miao, Yen-Yu Yang

Nature· May 2025

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DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs.
Weili Miao, Douglas F Porter, Zurab Siprashvili, Ian D Ferguson, Luca Ducoli, Yen-Yu Yang

Cell Rep· January 2025

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Glucose binds and activates NSUN2 to promote translation and epidermal differentiation.
Weili Miao, Douglas F Porter, Ya Li, Lindsey M Meservey, Yen-Yu Yang

Nucleic Acids Res· December 2024

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Cancer mutations rewire the RNA methylation specificity of METTL3-METTL14.
Chi Zhang, Robyn L Scott, Luiza Tunes, Meng-Hsiung Hsieh, Ping Wang, Yen-Yu Yang

Sci Adv· December 2024

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Mass Spectrometry-Based Proteomics for Assessing Epitranscriptomic Regulations.
Yen-Yu Yang, Zhongwen Cao, Yinsheng Wang

Mass Spectrom Rev· October 2024

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irCLIP-RNP and Re-CLIP reveal patterns of dynamic protein associations on RNA.
Luca Ducoli, Brian J Zarnegar, Douglas F Porter, Robin M Meyers, Weili Miao, Yen-Yu Yang

bioRxiv· September 2024

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Proximity Proteomics Revealed Aberrant mRNA Splicing Elicited by ALS-Linked Profilin-1 Mutants.
Songbo Wei, YenYu Yang, Yinsheng Wang

Anal Chem· October 2023

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Temporal Profiling of Epitranscriptomic Modulators during Osteogenic Differentiation of Human Embryonic Stem Cells.
Jiekai Yin, Tianyu F Qi, Yen-Yu Yang, Madeline Vera-Colón, Nicole I Zur Nieden

J Proteome Res· July 2023

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Targeted Proteomic Profiling Revealed Roles of Small GTPases during Osteogenic Differentiation.
Yen-Yu Yang, Ruthia Soh, Madeline Vera-Colón, Ming Huang, Nicole I Zur Nieden

Anal Chem· May 2023

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Cancer mutations rewire the RNA methylation specificity of METTL3-METTL14.
Chi Zhang, Luiza Tunes, Meng-Hsiung Hsieh, Ping Wang, Ashwani Kumar, YenYu Yang

bioRxiv· March 2023

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Distinct features of the host-parasite interactions between nonadherent and adherent Trichomonas vaginalis isolates.
Hong-Ming Hsu, Yen-Yu Yang, Yu-Hsin Huang, Chien-Hsin Chu, Ting-Jui Tu, Shi-Bing Yang

PLoS Negl Trop Dis· January 2023

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Glucose dissociates DDX21 dimers to regulate mRNA splicing and tissue differentiation.
Weili Miao, Douglas F Porter, Vanessa Lopez-Pajares, Zurab Siprashvili, Robin M Meyers, Yen-Yu Yang

Cell· January 2023

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Amyotrophic Lateral Sclerosis-Associated Mutants of SOD1 Modulate miRNA Biogenesis through Aberrant Interactions with Exportin 5.
Xingyuan Chen, Xiaomei He, Yen-Yu Yang, Yinsheng Wang

ACS Chem Biol· December 2022

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Targeted Proteomic Analysis of Small GTPases in Radioresistant Breast Cancer Cells.
Zi Gao, Yen-Yu Yang, Ming Huang, Tianyu F Qi, Handing Wang

Anal Chem· November 2022

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PROBER identifies proteins associated with programmable sequence-specific DNA in living cells.
Smarajit Mondal, Muthukumar Ramanathan, Weili Miao, Robin M Meyers, Deepti Rao, Yang Zhao, Yen-Yu Yang

Nat Methods· August 2022

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HSP90 and Aha1 modulate microRNA maturation through promoting the folding of Dicer1.
Xiaochuan Liu, Yen-Yu Yang, Yinsheng Wang

Nucleic Acids Res· July 2022

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The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.
Jordan M Meyers, Muthukumar Ramanathan, Ronald L Shanderson, Aimee Beck, Laura Donohue, Xue Yang, Yang Zhao, Yen-Yu Yang

PLoS Pathog· October 2021

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Quantitative Proteomic Analysis Revealed Broad Roles of -Methyladenosine in Heat Shock Response.
Weili Miao, Yen-Yu Yang, Yinsheng Wang

J Proteome Res· July 2021

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The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.
Jordan M Meyers, Muthukumar Ramanathan, Ronald L Shanderson, Laura Donohue, Ian Ferguson, Xue Yang, Yang Zhao, Yen-Yu Yang

bioRxiv· February 2021

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Proteome-wide Interrogation of Small GTPases Regulated by -Methyladenosine Modulators.
Yen-Yu Yang, Kailin Yu, Lin Li, Ming Huang, Yinsheng Wang

Anal Chem· July 2020

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