Publications by authors named "Allan Baker"

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A nuclear genome assembly of an extinct flightless bird, the little bush moa.
Scott V Edwards, Alison Cloutier, Glenn Cockburn, Robert Driver, Phil Grayson, Allan J Baker

Sci Adv· May 2024

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Monitoring sociodemographic inequality in COVID-19 vaccination uptake in England: a national linked data study.
Ted Dolby, Katie Finning, Allan Baker, Leigh Fowler-Dowd, Kamlesh Khunti

J Epidemiol Community Health· July 2022

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Global flyway evolution in red knots Calidris canutus and genetic evidence for a Nearctic refugium.
Jesse R Conklin, Yvonne I Verkuil, Phil F Battley, Chris J Hassell, Job Ten Horn, Allan J Baker

Mol Ecol· April 2022

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Inequalities in excess premature mortality in England during the COVID-19 pandemic: a cross-sectional analysis of cumulative excess mortality by area deprivation and ethnicity.
Sharmani Barnard, Paul Fryers, Justine Fitzpatrick, Sebastian Fox, Zachary Waller, Allan Baker

BMJ Open· December 2021

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Whole-Genome Analyses Resolve the Phylogeny of Flightless Birds (Palaeognathae) in the Presence of an Empirical Anomaly Zone.
Alison Cloutier, Timothy B Sackton, Phil Grayson, Michele Clamp, Allan J Baker

Syst Biol· November 2019

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Convergent regulatory evolution and loss of flight in paleognathous birds.
Timothy B Sackton, Phil Grayson, Alison Cloutier, Zhirui Hu, Jun S Liu, Allan J Baker

Science· April 2019

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DNA barcoding a unique avifauna: an important tool for evolution, systematics and conservation.
Jacqueline Tizard, Selina Patel, John Waugh, Erika Tavares, Tjard Bergmann, Allan Baker

BMC Evol Biol· February 2019

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Changes in health in the countries of the UK and 150 English Local Authority areas 1990-2016: a systematic analysis for the Global Burden of Disease Study 2016.
Nicholas Steel, John A Ford, John N Newton, Adrian C J Davis, Theo Vos, Allan Baker

Lancet· November 2018

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Response to articles on mortality in England and Wales.
Allan Baker, Faith Ege, Justine Fitzpatrick, John Newton

J R Soc Med· February 2018

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Conserved Nonexonic Elements: A Novel Class of Marker for Phylogenomics.
Scott V Edwards, Alison Cloutier, Allan J Baker

Syst Biol· November 2017

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Natural selection shaped the rise and fall of passenger pigeon genomic diversity.
Gemma G R Murray, André E R Soares, Ben J Novak, Nathan K Schaefer, James A Cahill, Allan J Baker

Science· November 2017

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PHYSIOLOGIC PARAMETERS AND THEIR RESPONSE TO HANDLING STRESS IN A NEOTROPICAL MIGRATORY SHOREBIRD DURING THE NONBREEDING SEASON.
Verónica L D'Amico, María G Palacios, Allan J Baker, Patricia M González, Enrique Madrid

J Wildl Dis· July 2017

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SNPs across time and space: population genomic signatures of founder events and epizootics in the House Finch ().
Allison J Shultz, Allan J Baker, Geoffrey E Hill, Paul M Nolan, Scott V Edwards

Ecol Evol· October 2016

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Explosive ice age diversification of kiwi.
Jason T Weir, Oliver Haddrath, Hugh A Robertson, Rogan M Colbourne, Allan J Baker

Proc Natl Acad Sci U S A· September 2016

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Feather development genes and associated regulatory innovation predate the origin of Dinosauria.
Craig B Lowe, Julia A Clarke, Allan J Baker, David Haussler, Scott V Edwards

Mol Biol Evol· January 2015

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Genomic support for a moa-tinamou clade and adaptive morphological convergence in flightless ratites.
Allan J Baker, Oliver Haddrath, John D McPherson, Alison Cloutier

Mol Biol Evol· July 2014

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Sepsis-associated mortality in England: an analysis of multiple cause of death data from 2001 to 2010.
Duncan McPherson, Clare Griffiths, Matthew Williams, Allan Baker, Ed Klodawski

BMJ Open· August 2013

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A trans-Amazonian screening of mtDNA reveals deep intraspecific divergence in forest birds and suggests a vast underestimation of species diversity.
Borja Milá, Erika S Tavares, Alberto Muñoz Saldaña, Jordan Karubian, Thomas B Smith, Allan J Baker

PLoS One· March 2013

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Characterization of MHC class I in a long-distance migrant shorebird suggests multiple transcribed genes and intergenic recombination.
Deborah M Buehler, Yvonne I Verkuil, Erika S Tavares, Allan J Baker

Immunogenetics· March 2013

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Complete mitochondrial genomes from four subspecies of common chaffinch (Fringilla coelebs): new inferences about mitochondrial rate heterogeneity, neutral theory, and phylogenetic relationships within the order Passeriformes.
H Dawn Marshall, Allan J Baker, Allison R Grant

Gene· March 2013

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Eight independent nuclear genes support monophyly of the plovers: the role of mutational variance in gene trees.
Allan J Baker, Yuri Yatsenko, Erika Sendra Tavares

Mol Phylogenet Evol· November 2012

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Multiple nuclear genes and retroposons support vicariance and dispersal of the palaeognaths, and an Early Cretaceous origin of modern birds.
Oliver Haddrath, Allan J Baker

Proc Biol Sci· November 2012

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DNA barcode detects high genetic structure within neotropical bird species.
Erika Sendra Tavares, Priscila Gonçalves, Cristina Yumi Miyaki, Allan J Baker

PLoS One· July 2012

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Multiple gene sequences resolve phylogenetic relationships in the shorebird suborder Scolopaci (Aves: Charadriiformes).
Rosemary Gibson, Allan Baker

Mol Phylogenet Evol· July 2012

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Genetic evaluation of the mating system in the blue-and-yellow macaw (Ara ararauna, Aves, Psittacidae) by DNA fingerprinting.
Renato Caparroz, Cristina Y Miyaki, Allan J Baker

Genet Mol Biol· January 2011

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