Publications by authors named "Anthony Borneman"

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Insight into how fermentation might contribute to the distinctiveness of Australian coffee.
Ruomeng Li, Cristian Varela, Damian Espinase Nandorfy, Anthony R Borneman, Laura J Hale

Food Chem· March 2025

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Genetic and phenotypic diversity of wine-associated Hanseniaspora species.
Cristobal A Onetto, Chris M Ward, Cristian Varela, Laura Hale, Simon A Schmidt, Anthony R Borneman

FEMS Yeast Res· January 2025

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Adaptation During the Shift from Entomopathogen to Endosymbiont Is Accompanied by Gene Loss and Intensified Selection.
Chris M Ward, Cristobal A Onetto, Anthony R Borneman

Genome Biol Evol· December 2024

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Sensitivity of Plasmopara viticola to selected fungicide groups and the occurrence of the G143A mutant in Australian grapevine isolates.
Ismail Ismail, Andrew S Taylor, Steven Van Den Heuvel, Anthony Borneman, Mark R Sosnowski

Pest Manag Sci· August 2024

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Temporal and spatial dynamics within the fungal microbiome of grape fermentation.
Cristobal A Onetto, Chris M Ward, Steven Van Den Heuvel, Laura Hale, Kathleen Cuijvers, Anthony R Borneman

Environ Microbiol· June 2024

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Recombination, admixture and genome instability shape the genomic landscape of Saccharomyces cerevisiae derived from spontaneous grape ferments.
Chris M Ward, Cristobal A Onetto, Steven Van Den Heuvel, Kathleen M Cuijvers, Laura J Hale, Anthony R Borneman

PLoS Genet· March 2024

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Parallel laboratory evolution and rational debugging reveal genomic plasticity to synthetic chromosome XIV defects.
Thomas C Williams, Heinrich Kroukamp, Xin Xu, Elizabeth L I Wightman, Briardo Llorente, Anthony R Borneman

Cell Genom· November 2023

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A special drop: Characterising yeast isolates associated with fermented beverages produced by Australia's indigenous peoples.
Cristian Varela, Lucien Alperstein, Joanna Sundstrom, Mark Solomon, Maggie Brady, Anthony Borneman

Food Microbiol· June 2023

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SO2 and copper tolerance exhibit an evolutionary trade-off in Saccharomyces cerevisiae.
Cristobal A Onetto, Dariusz R Kutyna, Radka Kolouchova, Jane McCarthy, Anthony R Borneman

PLoS Genet· March 2023

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Molecular approaches improving our understanding of Brettanomyces physiology.
Cristian Varela, Anthony R Borneman

FEMS Yeast Res· June 2022

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Construction of a synthetic Saccharomyces cerevisiae pan-genome neo-chromosome.
Dariusz R Kutyna, Cristobal A Onetto, Thomas C Williams, Hugh D Goold, Ian T Paulsen, Anthony R Borneman

Nat Commun· June 2022

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Population genomics of the grapevine pathogen Eutypa lata reveals evidence for population expansion and intraspecific differences in secondary metabolite gene clusters.
Cristobal A Onetto, Mark R Sosnowski, Steven Van Den Heuvel, Anthony R Borneman

PLoS Genet· April 2022

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Adaptive evolution of sulfite tolerance in Brettanomyces bruxellensis.
Caroline Bartel, Michael Roach, Cristobal Onetto, Chris Curtin, Cristian Varela, Anthony Borneman

FEMS Yeast Res· June 2021

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Factors Contributing to Interindividual Variation in Retronasal Odor Perception from Aroma Glycosides: The Role of Odorant Sensory Detection Threshold, Oral Microbiota, and Hydrolysis in Saliva.
Mango Parker, Cristobal Onetto, Josh Hixson, Eleanor Bilogrevic, Louisa Schueth, Anthony Borneman

J Agric Food Chem· September 2020

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Investigating the effects of Aureobasidium pullulans on grape juice composition and fermentation.
Cristobal A Onetto, Anthony R Borneman, Simon A Schmidt

Food Microbiol· September 2020

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Discovering the indigenous microbial communities associated with the natural fermentation of sap from the cider gum Eucalyptus gunnii.
Cristian Varela, Joanna Sundstrom, Kathleen Cuijvers, Vladimir Jiranek, Anthony Borneman

Sci Rep· September 2020

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Comparative genome analysis proposes three new Aureobasidium species isolated from grape juice.
Cristobal A Onetto, Simon A Schmidt, Michael J Roach, Anthony R Borneman

FEMS Yeast Res· September 2020

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Targeted gene deletion in Brettanomyces bruxellensis with an expression-free CRISPR-Cas9 system.
Cristian Varela, Caroline Bartel, Cristobal Onetto, Anthony Borneman

Appl Microbiol Biotechnol· August 2020

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Evaluation of Wine Yeast Competitive Fitness in Enologically Relevant Environments by Barcode Sequencing.
Simon A Schmidt, Radka Kolouchova, Angus H Forgan, Anthony R Borneman

G3 (Bethesda)· February 2020

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Identification of flocculant wine yeast strains with improved filtration-related phenotypes through application of high-throughput sedimentation rate assays.
Cristian Varela, Caroline Bartel, Damian Espinase Nandorfy, Anthony Borneman, Simon Schmidt

Sci Rep· February 2020

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Competition experiments between Brettanomyces bruxellensis strains reveal specific adaptation to sulfur dioxide and complex interactions at intraspecies level.
Marta Avramova, Paul Grbin, Anthony Borneman, Warren Albertin, Isabelle Masneuf-Pomarède

FEMS Yeast Res· May 2019

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Inactivating Mutations in Irc7p Are Common in Wine Yeasts, Attenuating Carbon-Sulfur β-Lyase Activity and Volatile Sulfur Compound Production.
Antonio G Cordente, Anthony R Borneman, Caroline Bartel, Dimitra Capone, Mark Solomon

Appl Environ Microbiol· March 2019

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Population sequencing reveals clonal diversity and ancestral inbreeding in the grapevine cultivar Chardonnay.
Michael J Roach, Daniel L Johnson, Joerg Bohlmann, Hennie J J van Vuuren, Steven J M Jones, Anthony R Borneman

PLoS Genet· November 2018

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Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies.
Michael J Roach, Simon A Schmidt, Anthony R Borneman

BMC Bioinformatics· November 2018

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