Publications by authors named "Collin A O'Leary"

Claim this Profile
I
Importance of De Novo Gene Evolution to Emerging Viral Threats: The ORF10 Strain-Restricted Orphan Gene of SARS-CoV-2 Promotes Pathogenesis.
Jeffrey A Haltom, Nidia S Trovao, Joseph W Guarnieri, Vincent Pan, Urminder Singh, Collin A O'Leary

Mol Biol Evol· October 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Intronic RNA secondary structural information captured for the human pre-mRNA.
Taylor O Eich, Collin A O'Leary, Walter N Moss

NAR Genom Bioinform· September 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The RNA secondary structure of androgen receptor-FL and V7 transcripts reveals novel regulatory regions.
Warren B Rouse, Van S Tompkins, Collin A O'Leary, Walter N Moss

Nucleic Acids Res· June 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Structure of the SARS-CoV-2 Frameshift Stimulatory Element with an Upstream Multibranch Loop.
Jake M Peterson, Scott T Becker, Collin A O'Leary, Puneet Juneja, Yang Yang

Biochemistry· May 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Identification of MYC intron 2 regions that modulate expression.
Van S Tompkins, Zheng Xue, Jake M Peterson, Warren B Rouse, Collin A O'Leary

PLoS One· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Discovery of RNA secondary structural motifs using sequence-ordered thermodynamic stability and comparative sequence analysis.
Jake M Peterson, Collin A O'Leary, Evelyn C Coppenbarger, Van S Tompkins, Walter N Moss

MethodsX· December 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
SARS-CoV-2 Orphan Gene ORF10 Contributes to More Severe COVID-19 Disease.
Jeffrey Haltom, Nidia S Trovao, Joseph Guarnieri, Pan Vincent, Urminder Singh, Collin A O'Leary

medRxiv· November 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
ScanFold 2.0: a rapid approach for identifying potential structured RNA targets in genomes and transcriptomes.
Ryan J Andrews, Warren B Rouse, Collin A O'Leary, Nicholas J Booher, Walter N Moss

PeerJ· January 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Thermodynamic and structural characterization of an EBV infected B-cell lymphoma transcriptome.
Collin A O'Leary, S Van Tompkins, Warren B Rouse, Gijong Nam, Walter N Moss

NAR Genom Bioinform· December 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Expansion of the RNAStructuromeDB to include secondary structural data spanning the human protein-coding transcriptome.
Warren B Rouse, Collin A O'Leary, Nicholas J Booher, Walter N Moss

Sci Rep· August 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Structural Context of a Critical Exon of Spinal Muscular Atrophy Gene.
Natalia N Singh, Collin A O'Leary, Taylor Eich, Walter N Moss, Ravindra N Singh

Front Mol Biosci· July 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Analyses of human cancer driver genes uncovers evolutionarily conserved RNA structural elements involved in posttranscriptional control.
Van S Tompkins, Warren B Rouse, Collin A O'Leary, Ryan J Andrews, Walter N Moss

PLoS One· March 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Secondary Structure of Subgenomic RNA M of SARS-CoV-2.
Marta Soszynska-Jozwiak, Agnieszka Ruszkowska, Ryszard Kierzek, Collin A O'Leary, Walter N Moss

Viruses· February 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
In silico analysis of local RNA secondary structure in influenza virus A, B and C finds evidence of widespread ordered stability but little evidence of significant covariation.
Jake M Peterson, Collin A O'Leary, Walter N Moss

Sci Rep· January 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A map of the SARS-CoV-2 RNA structurome.
Ryan J Andrews, Collin A O'Leary, Van S Tompkins, Jake M Peterson, Hafeez S Haniff

NAR Genom Bioinform· June 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Design of small molecules targeting RNA structure from sequence.
Andrei Ursu, Jessica L Childs-Disney, Ryan J Andrews, Collin A O'Leary, Samantha M Meyer

Chem Soc Rev· October 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Targeting the SARS-CoV-2 RNA Genome with Small Molecule Binders and Ribonuclease Targeting Chimera (RIBOTAC) Degraders.
Hafeez S Haniff, Yuquan Tong, Xiaohui Liu, Jonathan L Chen, Blessy M Suresh, Collin A O'Leary

ACS Cent Sci· October 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
A survey of RNA secondary structural propensity encoded within human herpesvirus genomes: global comparisons and local motifs.
Ryan J Andrews, Collin A O'Leary, Walter N Moss

PeerJ· September 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
R
RNA structural analysis of the MYC mRNA reveals conserved motifs that affect gene expression.
Collin A O'Leary, Ryan J Andrews, Van S Tompkins, Jonathan L Chen, Jessica L Childs-Disney

PLoS One· February 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis