Publications by authors named "Corey Watson"

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The current landscape of adaptive immune receptor genomic and repertoire data: OGRDB and VDJbase.
William D Lees, Ayelet Peres, Vered Klein, Naama Amos, Uddalok Jana, Corey T Watson

Nucleic Acids Res· November 2025

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Immunogenomics Approaches to Studying Antibody Repertoires and Vaccine Responses in Ruminants.
Yana Safonova, Andrew Collins, Brenda M Murdoch, Benjamin D Rosen, Timothy P L Smith, Corey T Watson

Annu Rev Anim Biosci· November 2025

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Germline polymorphisms in the immunoglobulin kappa and lambda loci underpinning antibody light chain repertoire variability.
Eric Engelbrecht, Oscar L Rodriguez, William Lees, Zach Vanwinkle, Kaitlyn Shields, Corey T Watson

Nat Commun· November 2025

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Ultra-long sequencing for contiguous haplotype resolution of the human immunoglobulin heavy-chain locus.
Mari B Gornitzka, Egil Røsjø, Uddalok Jana, Easton E Ford, Alan Tourancheau, Corey T Watson

Genome Res· October 2025

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The human IG heavy chain constant gene locus is enriched for large structural variants and coding polymorphisms that vary among human populations.
Uddalok Jana, Oscar L Rodriguez, William Lees, Eric Engelbrecht, Zach Vanwinkle, Corey T Watson

Cell Genom· October 2025

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Structural and genetic signatures of two classes of HCV E2 neutralizing face antibodies from non-human primates immunized with a recombinant E1E2.
Yen T K Nguyen, Fang Chen, Erick Giang, Swati Saha, Lynn A Ueno, Corey T Watson

bioRxiv· October 2025

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The human IG heavy chain constant gene locus is enriched for large structural variants and coding polymorphisms that vary among human populations.
Uddalok Jana, Oscar L Rodriguez, William Lees, Eric Engelbrecht, Zach Vanwinkle, Corey T Watson

bioRxiv· September 2025

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The Adaptive Immune Receptor Repertoire Knowledge Commons: An invitation to the community.
Lindsay G Cowell, Scott Christley, Felix Breden, Kevin A Burns, Brian D Corrie, Corey T Watson

Cell Syst· September 2025

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Germline polymorphisms in the immunoglobulin kappa and lambda loci explain variation in the expressed light chain antibody repertoire.
Eric Engelbrecht, Oscar L Rodriguez, William Lees, Zach Vanwinkle, Kaitlyn Shields, Corey T Watson

bioRxiv· July 2025

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Comparative Analysis of Mammalian Adaptive Immune Loci Revealed Spectacular Divergence and Common Genetic Patterns.
Mariia Pospelova, Katalin Voss, Anton Zamyatin, Corey T Watson, Klaus-Peter Koepfli

Mol Biol Evol· July 2025

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Characterization of extensive diversity in immunoglobulin light chain variable germline genes across biomedically important mouse strains.
Justin T Kos, Yana Safonova, Kaitlyn Shields, Catherine A Silver, William D Lees, Corey T Watson

Immunohorizons· July 2025

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Germline polymorphisms in the immunoglobulin kappa and lambda loci explain variation in the expressed light chain antibody repertoire.
Eric Engelbrecht, Oscar L Rodriguez, William Lees, Zach Vanwinkle, Kaitlyn Shields, Corey T Watson

Res Sq· July 2025

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Complete sequencing of ape genomes.
DongAhn Yoo, Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A Logsdon, Corey T Watson

Nature· May 2025

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CloseRead: a tool for assessing assembly errors in immunoglobulin loci applied to vertebrate long-read genome assemblies.
Yixin Zhu, Corey Watson, Yana Safonova, Matt Pennell, Anton Bankevich

Genome Biol· May 2025

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Human genetic variation shapes the antibody repertoire across B cell development.
Oscar L Rodriguez, Xiang Qiu, Kaitlyn Shields, Christoper Dunn, Amit Singh, Corey T Watson

bioRxiv· May 2025

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Diverse priming outcomes under conditions of very rare precursor B cells.
Patrick J Madden, Ester Marina-Zárate, Kristen A Rodrigues, Jon M Steichen, Monolina Shil, Corey T Watson

Immunity· April 2025

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A Broad Survey and Functional Analysis of Immunoglobulin Loci Variation in Rhesus Macaques.
Ayelet Peres, Amit A Upadhyay, Vered Hana Klein, Swati Saha, Oscar L Rodriguez, Corey T Watson

bioRxiv· March 2025

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Single-cell transcriptomics of melanoma sentinel lymph nodes identifies immune cell signatures associated with metastasis.
Eric Engelbrecht, Bryce F Stamp, Lewis Chew, Omar Sadi Sarkar, Phillip Harter, Corey T Watson

JCI Insight· March 2025

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Ultrasensitive allele inference from immune repertoire sequencing data with MiXCR.
Artem Mikelov, George Nefediev, Alexander Tashkeev, Oscar L Rodriguez, Diego Aguilar Ortmans, Corey T Watson

Genome Res· December 2024

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Diverse priming outcomes under conditions of very rare precursor B cells.
Patrick J Madden, Ester Marina-Zárate, Kristen A Rodrigues, Jon M Steichen, Monolina Shil, Corey T Watson

bioRxiv· November 2024

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Complete sequencing of ape genomes.
DongAhn Yoo, Arang Rhie, Prajna Hebbar, Francesca Antonacci, Glennis A Logsdon, Corey T Watson

bioRxiv· October 2024

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Addressing Technical Pitfalls in Pursuit of Molecular Factors That Mediate Immunoglobulin Gene Regulation.
Eric Engelbrecht, Oscar L Rodriguez, Corey T Watson

J Immunol· September 2024

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Assessing Assembly Errors in Immunoglobulin Loci: A Comprehensive Evaluation of Long-read Genome Assemblies Across Vertebrates.
Yixin Zhu, Corey Watson, Yana Safonova, Matt Pennell, Anton Bankevich

bioRxiv· August 2024

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The Ruminant Telomere-to-Telomere (RT2T) Consortium.
Theodore S Kalbfleisch, Stephanie D McKay, Brenda M Murdoch, David L Adelson, Diego Almansa-Villa, Corey Watson

Nat Genet· August 2024

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Author Correction: Vaccination induces broadly neutralizing antibody precursors to HIV gp41.
Torben Schiffner, Ivy Phung, Rashmi Ray, Adriana Irimia, Ming Tian, Corey T Watson

Nat Immunol· July 2024

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