Publications by authors named "Fiona M McCarthy"

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Emerging technologies in poultry genomics: Unlocking innovation for the future of sustainable production.
Huaijun Zhou, Fiona M McCarthy, Tae Hyun Kim, Wesley Warren, Guolong Zhang

Poult Sci· December 2025

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Normative aging results in degradation of gene networks in a zebra finch basal ganglia nucleus dedicated to vocal behavior.
Charles M Higgins, Sri Harsha Vishwanath, Fiona M McCarthy, Michelle L Gordon, Beate Peter

Neurobiol Aging· May 2025

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The Farm Animal Genotype-Tissue Expression (FarmGTEx) Project.
Lingzhao Fang, Jinyan Teng, Qing Lin, Zhonghao Bai, Shuli Liu, Fiona M McCarthy

Nat Genet· April 2025

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Immunoglobulin-like receptors in chickens: identification, functional characterization, and renaming to cluster homolog of immunoglobulin-like receptors.
Brandi A Sparling, Theros T Ng, Anaid Carlo-Allende, Fiona M McCarthy, Robert L Taylor

Poult Sci· February 2024

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Current challenges and future of agricultural genomes to phenomes in the USA.
Christopher K Tuggle, Jennifer L Clarke, Brenda M Murdoch, Eric Lyons, Nicole M Scott, Fiona M McCarthy

Genome Biol· January 2024

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Comparative proteomic analysis of tail regeneration in the green anole lizard, .
Cindy Xu, Elizabeth D Hutchins, Walter Eckalbar, Ken Pendarvis, Derek M Benson, Fiona M McCarthy

Nat Sci (Weinh)· January 2024

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Proteomic insight into human directed selection of the domesticated chicken Gallus gallus.
Carl J Schmidt, Dong Kyun Kim, G Ken Pendarvis, Behnam Abasht, Fiona M McCarthy

PLoS One· August 2023

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The case for standardizing gene nomenclature in vertebrates.
Fiona M McCarthy, Tamsin E M Jones, Anne E Kwitek, Cynthia L Smith, Peter D Vize

Nature· February 2023

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Fourth Report on Chicken Genes and Chromosomes 2022.
Jacqueline Smith, James M Alfieri, Nick Anthony, Peter Arensburger, Giridhar N Athrey, Fiona M McCarthy

Cytogenet Genome Res· January 2023

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Workflows for Rapid Functional Annotation of Diverse Arthropod Genomes.
Surya Saha, Amanda M Cooksey, Anna K Childers, Monica F Poelchau, Fiona M McCarthy

Insects· August 2021

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Modeling the pasture-associated severe equine asthma bronchoalveolar lavage fluid proteome identifies molecular events mediating neutrophilic airway inflammation.
Lauren A Bright, Wellesley Dittmar, Bindu Nanduri, Fiona M McCarthy, Nisma Mujahid

Vet Med (Auckl)· May 2019

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Oxygen Perfusion (Persufflation) of Human Pancreata Enhances Insulin Secretion and Attenuates Islet Proinflammatory Signaling.
Amy C Kelly, Kate E Smith, William G Purvis, Catherine G Min, Craig S Weber, Fiona M McCarthy

Transplantation· January 2019

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Chickspress: a resource for chicken gene expression.
Fiona M McCarthy, Ken Pendarvis, Amanda M Cooksey, Cathy R Gresham, Matt Bomhoff

Database (Oxford)· January 2019

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In vitro characterization of neonatal, juvenile, and adult porcine islet oxygen demand, β-cell function, and transcriptomes.
Kate E Smith, William G Purvis, Melissa A Davis, Catherine G Min, Amanda M Cooksey, Fiona M McCarthy

Xenotransplantation· November 2018

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HPIDB 2.0: a curated database for host-pathogen interactions.
Mais G Ammari, Cathy R Gresham, Fiona M McCarthy, Bindu Nanduri

Database (Oxford)· November 2017

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Acute Ischemia Induced by High-Density Culture Increases Cytokine Expression and Diminishes the Function and Viability of Highly Purified Human Islets of Langerhans.
Kate E Smith, Amy C Kelly, Catherine G Min, Craig S Weber, Fiona M McCarthy

Transplantation· November 2017

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RNA Sequencing Exposes Adaptive and Immune Responses to Intrauterine Growth Restriction in Fetal Sheep Islets.
Amy C Kelly, Christopher A Bidwell, Fiona M McCarthy, David J Taska, Miranda J Anderson

Endocrinology· April 2017

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Resources and Recommendations for Using Transcriptomics to Address Grand Challenges in Comparative Biology.
Donald L Mykles, Karen G Burnett, David S Durica, Blake L Joyce, Fiona M McCarthy

Integr Comp Biol· December 2016

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Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC.
Weerachai Jaratlerdsiri, Janine Deakin, Ricardo M Godinez, Xueyan Shan, Daniel G Peterson, Fiona M McCarthy

PLoS One· October 2015

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Identification of dopamine receptors across the extant avian family tree and analysis with other clades uncovers a polyploid expansion among vertebrates.
Asher Haug-Baltzell, Erich D Jarvis, Fiona M McCarthy, Eric Lyons

Front Neurosci· October 2015

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Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project.
Leif Andersson, Alan L Archibald, Cynthia D Bottema, Rudiger Brauning, Shane C Burgess, Fiona M McCarthy

Genome Biol· March 2015

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Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.
Richard E Green, Edward L Braun, Joel Armstrong, Dent Earl, Ngan Nguyen, Fiona M McCarthy

Science· December 2014

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Identification of canine platelet proteins separated by differential detergent fractionation for nonelectrophoretic proteomics analyzed by Gene Ontology and pathways analysis.
Shauna A Trichler, Sandra C Bulla, Nandita Mahajan, Kari V Lunsford, Ken Pendarvis, Fiona M McCarthy

Vet Med (Auckl)· June 2014

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Developing a biocuration workflow for AgBase, a non-model organism database.
Lakshmi Pillai, Philippe Chouvarine, Catalina O Tudor, Carl J Schmidt, K Vijay-Shanker, Fiona M McCarthy

Database (Oxford)· April 2013

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Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.
John A St John, Edward L Braun, Sally R Isberg, Lee G Miles, Amanda Y Chong, Fiona M McCarthy

Genome Biol· January 2012

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