Publications by authors named "Marcin Cymborowski"

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CMM-An enhanced platform for interactive validation of metal binding sites.
Michal Gucwa, Joanna Lenkiewicz, Heping Zheng, Marcin Cymborowski, David R Cooper

Protein Sci· January 2023

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Optimal structure determination from sub-optimal diffraction data.
Wladek Minor, Marcin Cymborowski, Dominika Borek, David R Cooper, Maksymilian Chruszcz

Protein Sci· January 2022

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Rapid response to emerging biomedical challenges and threats.
Marek Grabowski, Joanna M Macnar, Marcin Cymborowski, David R Cooper, Ivan G Shabalin

IUCrJ· May 2021

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State-of-the-Art Data Management: Improving the Reproducibility, Consistency, and Traceability of Structural Biology and in Vitro Biochemical Experiments.
David R Cooper, Marek Grabowski, Matthew D Zimmerman, Przemyslaw J Porebski, Ivan G Shabalin, Marcin Cymborowski

Methods Mol Biol· March 2021

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Synchrotron Radiation as a Tool for Macromolecular X-Ray Crystallography: a XXI Century Perspective.
Marek Grabowski, David R Cooper, Dariusz Brzezinski, Joanna M Macnar, Ivan G Shabalin, Marcin Cymborowski

Nucl Instrum Methods Phys Res B· February 2021

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Covid-19.bioreproducibility.org: A web resource for SARS-CoV-2-related structural models.
Dariusz Brzezinski, Marcin Kowiel, David R Cooper, Marcin Cymborowski, Marek Grabowski

Protein Sci· January 2021

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The Integrated Resource for Reproducibility in Macromolecular Crystallography: Experiences of the first four years.
Marek Grabowski, Marcin Cymborowski, Przemyslaw J Porebski, Tomasz Osinski, Ivan G Shabalin

Struct Dyn· November 2019

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A public database of macromolecular diffraction experiments.
Marek Grabowski, Karol M Langner, Marcin Cymborowski, Przemyslaw J Porebski, Piotr Sroka

Acta Crystallogr D Struct Biol· November 2016

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Protein purification and crystallization artifacts: The tale usually not told.
Ewa Niedzialkowska, Olga Gasiorowska, Katarzyna B Handing, Karolina A Majorek, Przemyslaw J Porebski, Marcin Cymborowski

Protein Sci· March 2016

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Fitmunk: improving protein structures by accurate, automatic modeling of side-chain conformations.
Przemyslaw Jerzy Porebski, Marcin Cymborowski, Marta Pasenkiewicz-Gierula, Wladek Minor

Acta Crystallogr D Struct Biol· February 2016

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Structure of Escherichia coli RutC, a member of the YjgF family and putative aminoacrylate peracid reductase of the rut operon.
Aleksandra Alicja Knapik, Janusz Jurand Petkowski, Zbyszek Otwinowski, Marcin Tadeusz Cymborowski, David Robert Cooper

Acta Crystallogr Sect F Struct Biol Cryst Commun· November 2012

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A multi-faceted analysis of RutD reveals a novel family of α/β hydrolases.
Aleksandra A Knapik, Janusz J Petkowski, Zbyszek Otwinowski, Marcin T Cymborowski, David R Cooper

Proteins· October 2012

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Identification of unknown protein function using metabolite cocktail screening.
Igor A Shumilin, Marcin Cymborowski, Olga Chertihin, Kula N Jha, John C Herr

Structure· October 2012

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Structure of a short-chain dehydrogenase/reductase from Bacillus anthracis.
Jing Hou, Kamila Wojciechowska, Heping Zheng, Maksymilian Chruszcz, David R Cooper, Marcin Cymborowski

Acta Crystallogr Sect F Struct Biol Cryst Commun· June 2012

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Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.
Przemyslaw J Porebski, Maria Klimecka, Maksymilian Chruszcz, Robert A Nicholls, Krzysztof Murzyn, Marcin Cymborowski

FEBS J· March 2012

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Crystal structure of a putative transcriptional regulator SCO0520 from Streptomyces coelicolor A3(2) reveals an unusual dimer among TetR family proteins.
Ekaterina V Filippova, Maksymilian Chruszcz, Marcin Cymborowski, Jun Gu, Alexei Savchenko

J Struct Funct Genomics· September 2011

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Structural analysis of a putative aminoglycoside N-acetyltransferase from Bacillus anthracis.
Maria M Klimecka, Maksymilian Chruszcz, Jose Font, Tatiana Skarina, Igor Shumilin, Marcin Cymborowski

J Mol Biol· July 2011

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Diffraction data analysis in the presence of radiation damage.
Dominika Borek, Marcin Cymborowski, Mischa Machius, Wladek Minor, Zbyszek Otwinowski

Acta Crystallogr D Biol Crystallogr· April 2010

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The structure of pyogenecin immunity protein, a novel bacteriocin-like immunity protein from Streptococcus pyogenes.
Changsoo Chang, Penny Coggill, Alex Bateman, Robert D Finn, Marcin Cymborowski

BMC Struct Biol· December 2009

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The crystal structure of the AF2331 protein from Archaeoglobus fulgidus DSM 4304 forms an unusual interdigitated dimer with a new type of alpha + beta fold.
Shuren Wang, Olga Kirillova, Maksymilian Chruszcz, Dominik Gront, Matthew D Zimmerman, Marcin T Cymborowski

Protein Sci· November 2009

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Function-biased choice of additives for optimization of protein crystallization - the case of the putative thioesterase PA5185 from Pseudomonas aeruginosa PAO1.
Maksymilian Chruszcz, Matthew D Zimmerman, Shuren Wang, Katarzyna D Koclega, Heping Zheng, Marcin Cymborowski

Cryst Growth Des· November 2008

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In situ proteolysis for protein crystallization and structure determination.
Aiping Dong, Xiaohui Xu, Aled M Edwards, , , Marcin Cymborowski

Nat Methods· December 2007

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Crystal structure of a transcriptional regulator TM1030 from Thermotoga maritima solved by an unusual MAD experiment.
Katarzyna D Koclega, Maksymilian Chruszcz, Matthew D Zimmerman, Marcin Cymborowski, Elena Evdokimova

J Struct Biol· September 2007

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Crystal structures of TM0549 and NE1324--two orthologs of E. coli AHAS isozyme III small regulatory subunit.
Janusz J Petkowski, Maksymilian Chruszcz, Matthew D Zimmerman, Heping Zheng, Tatiana Skarina, Marcin T Cymborowski

Protein Sci· July 2007

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Crystal structure of RNase T, an exoribonuclease involved in tRNA maturation and end turnover.
Yuhong Zuo, Heping Zheng, Yong Wang, Maksymilian Chruszcz, Marcin Cymborowski

Structure· April 2007

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