Publications by authors named "Thomas A Kohl"

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Use of Whole Genome Sequencing for Mycobacterium tuberculosis Complex Antimicrobial Susceptibility Testing.
Vanessa Mohr, Lindsay Sonnenkalb, Christian Utpatel, Ivan Barilar, Margo Diricks, Thomas A Kohl

Methods Mol Biol· July 2024

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Use of Whole Genome Sequencing for Mycobacterium tuberculosis Complex Antimicrobial Susceptibility Testing: From Sequence Data to Resistance Profiles.
Viola Dreyer, Lindsay Sonnenkalb, Margo Diricks, Christian Utpatel, Ivan Barilar, Thomas A Kohl

Methods Mol Biol· July 2024

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Clinical and genomic features of Mycobacterium avium complex: a multi-national European study.
Nils Wetzstein, Margo Diricks, Thomas B Anton, Sönke Andres, Martin Kuhns, Thomas A Kohl

Genome Med· July 2024

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Challenging the gold standard: the limitations of molecular assays for detection of heteroresistance.
Sarah N Danchuk, Ori E Solomon, Thomas Andreas Kohl, Viola Dreyer, Ivan Barilar

Thorax· June 2024

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Appeal from the European tuberculosis reference laboratory network (ERLTB-Net) for improving the diagnosis of infections due to nontuberculous mycobacteria.
Elisa Tagliani, Thomas A Kohl, Arash Ghodousi, Ramona Groenheit, Yen Holicka

Clin Microbiol Infect· January 2024

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Two-stage tuberculosis diagnostics: combining centrifugal microfluidics to detect TB infection and Inh and Rif resistance at the point of care with subsequent antibiotic resistance profiling by targeted NGS.
Judith Schlanderer, Harald Hoffmann, Jan Lüddecke, Andrey Golubov, Wolfgang Grasse, Thomas A Kohl

Lab Chip· December 2023

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Clinical characteristics and outcome of Mycobacterium chimaera infections after cardiac surgery: systematic review and meta-analysis of 180 heater-cooler unit-associated cases.
Nils Wetzstein, Thomas A Kohl, Margo Diricks, Silvia Mas-Peiro, Tomas Holubec

Clin Microbiol Infect· August 2023

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Blind spot in endocarditis guidelines: prosthetic valve endocarditis after cardiac surgery-a case series.
Janina Trauth, Ulrich Matt, Thomas A Kohl, Stefan Niemann, Susanne Herold

Eur Heart J Case Rep· August 2023

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Transmission Dynamics of a Mycobacterium tuberculosis Complex Outbreak in an Indigenous Population in the Colombian Amazon Region.
Francy J Pérez-Llanos, Viola Dreyer, Ivan Barilar, Christian Utpatel, Thomas A Kohl

Microbiol Spectr· June 2023

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Investigating resistance in clinical Mycobacterium tuberculosis complex isolates with genomic and phenotypic antimicrobial susceptibility testing: a multicentre observational study.
Iris Finci, Audrey Albertini, Matthias Merker, Sönke Andres, Nino Bablishvili, Thomas A Kohl

Lancet Microbe· September 2022

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Molecular Epidemiology of Mycobacterium abscessus Isolates Recovered from German Cystic Fibrosis Patients.
Nils Wetzstein, Margo Diricks, Thomas A Kohl, Thomas A Wichelhaus, Sönke Andres

Microbiol Spectr· August 2022

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Delineating Mycobacterium abscessus population structure and transmission employing high-resolution core genome multilocus sequence typing.
Margo Diricks, Matthias Merker, Nils Wetzstein, Thomas A Kohl, Stefan Niemann

Nat Commun· August 2022

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Transcontinental spread and evolution of Mycobacterium tuberculosis W148 European/Russian clade toward extensively drug resistant tuberculosis.
Matthias Merker, Jean-Philippe Rasigade, Maxime Barbier, Helen Cox, Silke Feuerriegel, Thomas A Kohl

Nat Commun· August 2022

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Ancient and recent differences in the intrinsic susceptibility of Mycobacterium tuberculosis complex to pretomanid.
Anna Bateson, Julio Ortiz Canseco, Timothy D McHugh, Adam A Witney, Silke Feuerriegel, Thomas A Kohl

J Antimicrob Chemother· May 2022

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Origin and Global Expansion of Complex Lineage 3.
Yassir A Shuaib, Christian Utpatel, Thomas A Kohl, Ivan Barilar, Margo Diricks

Genes (Basel)· May 2022

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Sub-Lineage Specific Phenolic Glycolipid Patterns in the Complex Lineage 1.
Nicolas Gisch, Christian Utpatel, Lisa M Gronbach, Thomas A Kohl, Ursula Schombel

Front Microbiol· March 2022

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Loss of Mobile Genomic Islands in Metal-Resistant, Hydrogen-Oxidizing Cupriavidus metallidurans.
Cornelia Große, Thomas A Kohl, Stefan Niemann, Martin Herzberg, Dietrich H Nies

Appl Environ Microbiol· February 2022

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Whole genome sequencing-based classification of human-related Haemophilus species and detection of antimicrobial resistance genes.
Margo Diricks, Thomas A Kohl, Nadja Käding, Vladislav Leshchinskiy, Susanne Hauswaldt

Genome Med· February 2022

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Correction to: Whole genome sequencing-based classifcation of human-related Haemophilus species and detection of antimicrobial resistance genes.
Margo Diricks, Thomas A Kohl, Nadja Käding, Vladislav Leshchinskiy, Susanne Hauswaldt

Genome Med· February 2022

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The global outbreak of Mycobacterium chimaera infections in cardiac surgery-a systematic review of whole-genome sequencing studies and joint analysis.
Peter W Schreiber, Thomas A Kohl, Stefan P Kuster, Stefan Niemann, Hugo Sax

Clin Microbiol Infect· November 2021

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Design of Multidrug-Resistant Tuberculosis Treatment Regimens Based on DNA Sequencing.
Hans-Peter Grobbel, Matthias Merker, Niklas Köhler, Sönke Andres, Harald Hoffmann, Thomas A Kohl

Clin Infect Dis· October 2021

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Erratum for Alio et al., "Phenotypic and Transcriptomic Analyses of Seven Clinical Stenotrophomonas maltophilia Isolates Identify a Small Set of Shared and Commonly Regulated Genes Involved in the Biofilm Lifestyle".
Ifey Alio, Mirja Gudzuhn, Pablo Pérez García, Dominik Danso, Marie Charlotte Schoelmerich, Thomas A Kohl

Appl Environ Microbiol· August 2021

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Transmission patterns of rifampicin resistant Mycobacterium tuberculosis complex strains in Cameroon: a genomic epidemiological study.
Matthias Merker, Nkongho F Egbe, Yannick R Ngangue, Comfort Vuchas, Thomas A Kohl

BMC Infect Dis· August 2021

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Implementation of whole genome sequencing for tuberculosis diagnostics in a low-middle income, high MDR-TB burden country.
Monica Vogel, Christian Utpatel, Caroline Corbett, Thomas A Kohl, Altyn Iskakova

Sci Rep· July 2021

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Secretome characterization of clinical isolates from the Mycobacterium abscessus complex provides insight into antigenic differences.
Fernanda Cornejo-Granados, Thomas A Kohl, Flor Vásquez Sotomayor, Sönke Andres, Rogelio Hernández-Pando

BMC Genomics· May 2021

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