Publications by authors named "Travis Clark"

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The use of 3D computer-aided design to optimize photoimmunotherapy catheter placement.
Kelly Bridgham, Pablo Llerena, Ayan Kumar, Eric Mastrolonardo, Raphael Banoub, Travis Clark

Oral Oncol· July 2025

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Greenhead (Tabanus nigrovittatus) and Its Microbiome: A Preliminary Study.
Emilie Lefoulon, Alex Truchon, Travis Clark, Courtney Long, Daniel Frey

Microbiol Spectr· October 2021

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Diminutive, degraded but dissimilar: genomes from filarial nematodes do not conform to a single paradigm.
Emilie Lefoulon, Travis Clark, Ricardo Guerrero, Israel Cañizales, Jorge Manuel Cardenas-Callirgos

Microb Genom· December 2020

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Clinical and analytical validation of FoundationOne Liquid CDx, a novel 324-Gene cfDNA-based comprehensive genomic profiling assay for cancers of solid tumor origin.
Ryan Woodhouse, Meijuan Li, Jason Hughes, David Delfosse, Joel Skoletsky, Travis Clark

PLoS One· October 2020

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The endosymbiont Wolbachia rebounds following antibiotic treatment.
Emma L Gunderson, Ian Vogel, Laura Chappell, Christina A Bulman, K C Lim, Travis Clark

PLoS Pathog· July 2020

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Pseudoscorpion Wolbachia symbionts: diversity and evidence for a new supergroup S.
Emilie Lefoulon, Travis Clark, Fanni Borveto, Marco Perriat-Sanguinet, Catherine Moulia

BMC Microbiol· June 2020

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Clinical utility of tumor genomic profiling in patients with high plasma circulating tumor DNA burden or metabolically active tumors.
Cathy Zhou, Zilong Yuan, Weijie Ma, Lihong Qi, Angelique Mahavongtrakul, Travis A Clark

J Hematol Oncol· November 2018

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Analytical Validation of a Hybrid Capture-Based Next-Generation Sequencing Clinical Assay for Genomic Profiling of Cell-Free Circulating Tumor DNA.
Travis A Clark, Jon H Chung, Mark Kennedy, Jason D Hughes, Niru Chennagiri

J Mol Diagn· September 2018

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Individualized Molecular Analyses Guide Efforts (IMAGE): A Prospective Study of Molecular Profiling of Tissue and Blood in Metastatic Triple-Negative Breast Cancer.
Heather A Parsons, Julia A Beaver, Ashley Cimino-Mathews, Siraj M Ali, Jennifer Axilbund, Travis A Clark

Clin Cancer Res· January 2017

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RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining.
Yan Guo, Jie Wu, Shilin Zhao, Fei Ye, Yinghao Su, Travis Clark

Int J Genomics· September 2016

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Current concepts in imaging evaluation of penetrating transmediastinal injury.
Martin L Gunn, R Travis Clark, Claudia T Sadro, Ken F Linnau, Claire K Sandstrom

Radiographics· November 2015

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Interaction with WDR5 promotes target gene recognition and tumorigenesis by MYC.
Lance R Thomas, Qingguo Wang, Brian C Grieb, Jason Phan, Audra M Foshage, Travis Clark

Mol Cell· May 2015

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Right ventricular long noncoding RNA expression in human heart failure.
Thomas G Di Salvo, Yan Guo, Yan Ru Su, Travis Clark, Evan Brittain

Pulm Circ· March 2015

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Three-stage quality control strategies for DNA re-sequencing data.
Yan Guo, Fei Ye, Quanghu Sheng, Travis Clark, David C Samuels

Brief Bioinform· November 2014

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A comparison of microRNA sequencing reproducibility and noise reduction using mirVana and TRIzol isolation methods.
Yan Guo, Amma Bosompem, Xu Zhong, Travis Clark, Yu Shyr

Int J Comput Biol Drug Des· September 2014

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High-throughput sequencing in mitochondrial DNA research.
Fei Ye, David C Samuels, Travis Clark, Yan Guo

Mitochondrion· July 2014

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Two-photon and time-resolved fluorescence spectroscopy as probes for structural determination in amyloid-β peptides and aggregates.
Travis B Clark, Marcin Ziółkowski, George C Schatz, Theodore Goodson

J Phys Chem B· March 2014

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An expressed retrogene of the master embryonic stem cell gene POU5F1 is associated with prostate cancer susceptibility.
Joan P Breyer, Daniel C Dorset, Travis A Clark, Kevin M Bradley, Tiina A Wahlfors

Am J Hum Genet· March 2014

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The NADH oxidase ENOX1, a critical mediator of endothelial cell radiosensitization, is crucial for vascular development.
Amudhan Venkateswaran, Konjeti R Sekhar, Daniel S Levic, David B Melville, Travis A Clark

Cancer Res· January 2014

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A unique covalent bond in basement membrane is a primordial innovation for tissue evolution.
Aaron L Fidler, Roberto M Vanacore, Sergei V Chetyrkin, Vadim K Pedchenko, Gautam Bhave, Travis A Clark

Proc Natl Acad Sci U S A· January 2014

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Two-photon fluorescence spectroscopy and imaging of 4-dimethylaminonaphthalimide peptide and protein conjugates.
Alan M McLean, Elke Socher, Oleg Varnavski, Travis B Clark, Barbara Imperiali

J Phys Chem B· December 2013

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Finding the lost treasures in exome sequencing data.
David C Samuels, Leng Han, Jiang Li, Sheng Quanghu, Travis A Clark

Trends Genet· October 2013

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Evaluation of allele frequency estimation using pooled sequencing data simulation.
Yan Guo, David C Samuels, Jiang Li, Travis Clark, Chung-I Li

ScientificWorldJournal· September 2013

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Calmodulin mutations associated with recurrent cardiac arrest in infants.
Lia Crotti, Christopher N Johnson, Elisabeth Graf, Gaetano M De Ferrari, Bettina F Cuneo, Travis Clark

Circulation· March 2013

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An integrated semiconductor device enabling non-optical genome sequencing.
Jonathan M Rothberg, Wolfgang Hinz, Todd M Rearick, Jonathan Schultz, William Mileski, Travis A Clark

Nature· July 2011

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