Publications by authors named "Xijin Ge"

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Code Interpreter for Bioinformatics: Are We There Yet?
Lei Wang, Xijin Ge, Li Liu, Gangqing Hu

Ann Biomed Eng· April 2024

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Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity.
Lingqi Kong, Karabi Saha, Yuchi Hu, Jada N Tschetter, Chase E Habben, Xijin Ge

Mob DNA· April 2022

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Influence of conceptus presence and preovulatory estradiol exposure on uterine gene transcripts and proteins around maternal recognition of pregnancy in beef cattle.
Emmalee J Northrop-Albrecht, Jerica J J Rich, Robert A Cushman, Runan Yao, Xijin Ge, George A Perry

Mol Cell Endocrinol· January 2022

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Influence of estradiol on bovine trophectoderm and uterine gene transcripts around maternal recognition of pregnancy†.
Emmalee J Northrop-Albrecht, Jerica J J Rich, Robert A Cushman, Runan Yao, Xijin Ge, George A Perry

Biol Reprod· August 2021

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iDEP Web Application for RNA-Seq Data Analysis.
Xijin Ge

Methods Mol Biol· June 2021

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nCov2019: an R package for studying the COVID-19 coronavirus pandemic.
Tianzhi Wu, Erqiang Hu, Xijin Ge, Guangchuang Yu

PeerJ· June 2021

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Hydrotropism in the primary roots of maize.
Yafang Wang, Yohannes Afeworki, Sisi Geng, Praveena Kanchupati, Muyu Gu, Xijin Ge, Donald Auger

New Phytol· June 2020

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Evaluating the impact of health awareness events on Google search frequency.
Zheng Hao, Miao Liu, Xijin Ge

Prev Med Rep· September 2019

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Comparative analysis of methicillin-sensitive and resistant Staphylococcus aureus exposed to emodin based on proteomic profiling.
Xiaoyu Ji, Xiaoqiang Liu, Yuanxia Peng, Ruoting Zhan, Hui Xu, Xijin Ge

Biochem Biophys Res Commun· December 2017

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ATOH1 Promotes Leptomeningeal Dissemination and Metastasis of Sonic Hedgehog Subgroup Medulloblastomas.
Katie B Grausam, Samuel D R Dooyema, Laure Bihannic, Hasitha Premathilake, A Sorana Morrissy, Antoine Forget, Xijin Ge, Stephanie Puget

Cancer Res· July 2017

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Root isoflavonoids and hairy root transformation influence key bacterial taxa in the soybean rhizosphere.
Laura J White, Xijin Ge, Volker S Brözel, Senthil Subramanian

Environ Microbiol· April 2017

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Genome-wide survey of interindividual differences of RNA stability in human lymphoblastoid cell lines.
Jubao Duan, Jianxin Shi, Xijin Ge, Lars Dölken, Winton Moy, Pablo V Gejman

Sci Rep· August 2013

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Regulation of gene expression with thyroid hormone in rats with myocardial infarction.
Yue-Feng Chen, James V Pottala, Nathan Y Weltman, Xijin Ge, Olga V Savinova, A Martin Gerdes

PLoS One· February 2013

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Early gene response of human brain microvascular endothelial cells to Listeria monocytogenes infection.
Chinling Wang, Chung-Hsi Chou, Charles Tseng, Xijin Ge, Lesya M Pinchuk

Can J Microbiol· May 2011

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Gene expression profiles of estrogen receptor-positive and estrogen receptor-negative breast cancers are detectable in histologically normal breast epithelium.
Kelly Graham, Xijin Ge, Antonio de Las Morenas, Anusri Tripathi, Carol L Rosenberg

Clin Cancer Res· January 2011

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The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.
Leming Shi, Gregory Campbell, Wendell D Jones, Fabien Campagne, Zhining Wen, Xijin Ge, Gene A Pennello, Roger G Perkins, Weigong Ge, George J Mulligan, Grier P Page, Juergen von Frese, Russell D Wolfinger

Nat Biotechnol· August 2010

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Cbf genes of the Fr-A2 allele are differentially regulated between long-term cold acclimated crown tissue of freeze-resistant and - susceptible, winter wheat mutant lines.
Fedora Sutton, Ding-Geng Chen, Xijin Ge, Don Kenefick

BMC Plant Biol· March 2009

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Gene expression profile analysis of human hepatocellular carcinoma using SAGE and LongSAGE.
Hui Dong, Xijin Ge, Yan Shen, Linlei Chen, Yalin Kong

BMC Med Genomics· January 2009

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Identifying nonspecific SAGE tags by context of gene expression.
Xijin Ge, San Ming Wang

Methods Mol Biol· April 2008

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Genome-wide analysis of antisense transcription with Affymetrix exon array.
Xijin Ge, Wendy S Rubinstein, Yong-Chul Jung, Qingfa Wu

BMC Genomics· January 2008

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Identification and characterization of lin-28 homolog B (LIN28B) in human hepatocellular carcinoma.
Yingqiu Guo, Yongxin Chen, Hirotaka Ito, Akira Watanabe, Xijin Ge

Gene· December 2006

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SAGE detects microRNA precursors.
Xijin Ge, Qingfa Wu, San Ming Wang

BMC Genomics· November 2006

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A large quantity of novel human antisense transcripts detected by LongSAGE.
Xijin Ge, Qingfa Wu, Yong-Chul Jung, Jun Chen, San Ming Wang

Bioinformatics· October 2006

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Elevated expression and potential roles of human Sp5, a member of Sp transcription factor family, in human cancers.
Yongxin Chen, Yingqiu Guo, Xijin Ge, Hirotaka Itoh, Akira Watanabe

Biochem Biophys Res Commun· February 2006

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Gene expression profiles in acute myeloid leukemia with common translocations using SAGE.
Sanggyu Lee, Jianjun Chen, Guolin Zhou, Run Zhang Shi, Gerard G Bouffard, Xijin Ge

Proc Natl Acad Sci U S A· January 2006

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