Publications by authors named "Walter Moss"

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Transcriptome-wide prediction of heat-sensitive RNA structures in .
Mason W Eisenhauer, Abdelraouf O Dapour, Warren B Rouse, Walter N Moss

Front Plant Sci· December 2025

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Identification of conserved RNA secondary structures in human respiratory syncytial virus A (hRSV A).
Damilare K Dabiri, Warren B Rouse, Walter N Moss

NAR Genom Bioinform· December 2025

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Live-Cell Covalent Profiling Reveals Principles of RNA-Small Molecule Recognition across the Human Transcriptome.
Yuquan Tong, Amirhossein Taghavi, Xiaoxuan Su, Xueyi Yang, Warren Rouse, Walter N Moss

bioRxiv· November 2025

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Importance of De Novo Gene Evolution to Emerging Viral Threats: The ORF10 Strain-Restricted Orphan Gene of SARS-CoV-2 Promotes Pathogenesis.
Jeffrey A Haltom, Nidia S Trovao, Joseph W Guarnieri, Vincent Pan, Urminder Singh, Walter N Moss

Mol Biol Evol· October 2025

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Identification of a conserved RNA structure in the 3'UTR: Implications for post-transcriptional regulation.
Van S Tompkins, Warren B Rouse, Jibo Wang, Michael E Woodman, Ernst R Dow, Walter N Moss

bioRxiv· June 2025

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Intronic RNA secondary structural information captured for the human pre-mRNA.
Taylor O Eich, Collin A O'Leary, Walter N Moss

NAR Genom Bioinform· September 2024

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Targeting sgRNA N secondary structure as a way of inhibiting SARS-CoV-2 replication.
Agnieszka Baliga-Gil, Marta Soszynska-Jozwiak, Agnieszka Ruszkowska, Izabela Szczesniak, Ryszard Kierzek, Walter N Moss

Antiviral Res· August 2024

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Transcriptome-Wide, Unbiased Profiling of Ribonuclease Targeting Chimeras.
Yuquan Tong, Xiaoxuan Su, Warren Rouse, Jessica L Childs-Disney, Amirhossein Taghavi, Walter N Moss

J Am Chem Soc· August 2024

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The RNA secondary structure of androgen receptor-FL and V7 transcripts reveals novel regulatory regions.
Warren B Rouse, Van S Tompkins, Collin A O'Leary, Walter N Moss

Nucleic Acids Res· June 2024

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Structure of the SARS-CoV-2 Frameshift Stimulatory Element with an Upstream Multibranch Loop.
Jake M Peterson, Scott T Becker, Collin A O'Leary, Puneet Juneja, Yang Yang, Walter N Moss

Biochemistry· May 2024

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Sequences at gene segment termini inclusive of untranslated regions and partial open reading frames play a critical role in mammalian orthoreovirus S gene packaging.
Debarpan Dhar, Samir Mehanovic, Walter Moss, Cathy L Miller

PLoS Pathog· February 2024

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Identification of MYC intron 2 regions that modulate expression.
Van S Tompkins, Zheng Xue, Jake M Peterson, Warren B Rouse, Collin A O'Leary, Walter N Moss

PLoS One· January 2024

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Discovery of RNA secondary structural motifs using sequence-ordered thermodynamic stability and comparative sequence analysis.
Jake M Peterson, Collin A O'Leary, Evelyn C Coppenbarger, Van S Tompkins, Walter N Moss

MethodsX· December 2023

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SARS-CoV-2 Orphan Gene ORF10 Contributes to More Severe COVID-19 Disease.
Jeffrey Haltom, Nidia S Trovao, Joseph Guarnieri, Pan Vincent, Urminder Singh, Walter N Moss

medRxiv· November 2023

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Direct interaction of small non-coding RNAs CjNC140 and CjNC110 optimizes expression of key pathogenic phenotypes of .
Brandon Ruddell, Alan Hassall, Walter N Moss, Orhan Sahin, Paul J Plummer

mBio· August 2023

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In vivo secondary structural analysis of Influenza A virus genomic RNA.
Barbara Mirska, Tomasz Woźniak, Dagny Lorent, Agnieszka Ruszkowska, Jake M Peterson, Walter N Moss

Cell Mol Life Sci· May 2023

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Sequences at gene segment termini inclusive of untranslated regions and partial open reading frames play a critical role in mammalian orthoreovirus S gene packaging.
Debarpan Dhar, Samir Mehanovic, Walter Moss, Cathy L Miller

bioRxiv· May 2023

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Correction to "Transcriptome-Wide Mapping of Small-Molecule RNA-Binding Sites in Cells Informs an Isoform-Specific Degrader of mRNA".
Yuquan Tong, Quentin M R Gibaut, Warren Rouse, Jessica L Childs-Disney, Blessy M Suresh, Walter N Moss

J Am Chem Soc· April 2023

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ScanFold 2.0: a rapid approach for identifying potential structured RNA targets in genomes and transcriptomes.
Ryan J Andrews, Warren B Rouse, Collin A O'Leary, Nicholas J Booher, Walter N Moss

PeerJ· January 2023

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Thermodynamic and structural characterization of an EBV infected B-cell lymphoma transcriptome.
Collin A O'Leary, S Van Tompkins, Warren B Rouse, Gijong Nam, Walter N Moss

NAR Genom Bioinform· December 2022

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Expansion of the RNAStructuromeDB to include secondary structural data spanning the human protein-coding transcriptome.
Warren B Rouse, Collin A O'Leary, Nicholas J Booher, Walter N Moss

Sci Rep· August 2022

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Yuquan Tong, Quentin M R Gibaut, Warren Rouse, Jessica L Childs-Disney, Blessy M Suresh, Walter N Moss

J Am Chem Soc· July 2022

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Structural Context of a Critical Exon of Spinal Muscular Atrophy Gene.
Natalia N Singh, Collin A O'Leary, Taylor Eich, Walter N Moss, Ravindra N Singh

Front Mol Biosci· July 2022

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Secondary Structure of Subgenomic RNA M of SARS-CoV-2.
Marta Soszynska-Jozwiak, Agnieszka Ruszkowska, Ryszard Kierzek, Collin A O'Leary, Walter N Moss

Viruses· February 2022

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Secondary Structure of Influenza A Virus Genomic Segment 8 RNA Folded in a Cellular Environment.
Barbara Szutkowska, Klaudia Wieczorek, Ryszard Kierzek, Pawel Zmora, Jake M Peterson, Walter N Moss

Int J Mol Sci· February 2022

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